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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0429700 |
| Transcript ID | Lj3g3v0429700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: proton pump-interactor 1-like [Cicer arietinum] gi|502084555|ref|XP_004487714.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 249 | 249 | – | – | |
| PANTHER | 1 | 273 | 273 | 2.10E-98 | – | |
| MobiDBLite | 1 | 131 | 131 | – | – | |
| PANTHER | 1 | 273 | 273 | 2.10E-98 | ||
| Coils | 127 | 178 | 52 | – | – | |
| MobiDBLite | 147 | 231 | 85 | – | – | |
| TMHMM | 250 | 272 | 23 | – | – | |
| Phobius | 250 | 272 | 23 | – | – | |
| Phobius | 273 | 273 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). | ||
| Cellular component | Plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. | ||
| Biological process | Regulation of proton transport | Any process that modulates the frequency, rate or extent of proton transport into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of Lj3g3v0429700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0429700.1, powered by CORGI.
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