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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR029669
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.773s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0326859.1
n.a. PREDICTED: proton pump-interactor 1-like [Cicer arietinum] gi|502084555|ref|XP_004487714.1| chr0 170859123 170863907 -
2 domain predictions
3 GO terms
Lj3g3v0429700.1
n.a. PREDICTED: proton pump-interactor 1-like [Cicer arietinum] gi|502084555|ref|XP_004487714.1| chr3 4445457 4446961 -
2 domain predictions
3 GO terms
Lj3g3v0429700.2
n.a. PREDICTED: proton pump-interactor 1-like [Cicer arietinum] gi|502084555|ref|XP_004487714.1| chr3 4445457 4450180 -
2 domain predictions
3 GO terms
LotjaGi3g1v0047200.1
n.a. Proton pump interactor, putative; TAIR: AT4G27500.1 proton pump interactor 1; Swiss-Prot: sp|O23144|PPI1_ARATH Proton pump-interactor 1; TrEMBL-Plants: tr|A0A151S5G2|A0A151S5G2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0047200 LjG1.1_chr3 5024787 5029969 -
2 domain predictions
3 GO terms
LotjaGi3g1v0047200.2
n.a. Proton pump interactor, putative; TAIR: AT4G27500.1 proton pump interactor 1; Swiss-Prot: sp|O23144|PPI1_ARATH Proton pump-interactor 1; TrEMBL-Plants: tr|A0A151S5G2|A0A151S5G2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0047200 LjG1.1_chr3 5024946 5030006 -
2 domain predictions
3 GO terms
LotjaGi3g1v0153200.1
n.a. Proton pump interactor, putative; TAIR: AT4G27500.1 proton pump interactor 1; Swiss-Prot: sp|O23144|PPI1_ARATH Proton pump-interactor 1; TrEMBL-Plants: tr|V7BWN7|V7BWN7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0153200 LjG1.1_chr3 20709540 20715145 +
2 domain predictions
3 GO terms