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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0463490 |
| Transcript ID | Lj3g3v0463490.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cation/H(+) antiporter 1-like [Glycine max] gi|356542407|ref|XP_003539658.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 624 | 624 | 0 | – | |
| PANTHER | 1 | 624 | 624 | 0 | – | |
| Phobius | 1 | 14 | 14 | – | – | |
| Pfam | 2 | 251 | 250 | 1.40E-19 | ||
| Phobius | 15 | 35 | 21 | – | – | |
| TMHMM | 15 | 37 | 23 | – | – | |
| Phobius | 36 | 46 | 11 | – | – | |
| Phobius | 47 | 67 | 21 | – | – | |
| TMHMM | 49 | 71 | 23 | – | – | |
| Phobius | 68 | 86 | 19 | – | – | |
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 87 | 118 | 32 | – | – | |
| Phobius | 119 | 138 | 20 | – | – | |
| TMHMM | 135 | 157 | 23 | – | – | |
| Phobius | 139 | 158 | 20 | – | – | |
| Phobius | 159 | 163 | 5 | – | – | |
| Phobius | 164 | 185 | 22 | – | – | |
| TMHMM | 167 | 189 | 23 | – | – | |
| Phobius | 186 | 196 | 11 | – | – | |
| TMHMM | 196 | 218 | 23 | – | – | |
| Phobius | 197 | 217 | 21 | – | – | |
| Phobius | 218 | 228 | 11 | – | – | |
| TMHMM | 228 | 250 | 23 | – | – | |
| Phobius | 229 | 251 | 23 | – | – | |
| Phobius | 252 | 624 | 373 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v0463490.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0463490.1, powered by CORGI.
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