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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0465930 |
| Transcript ID | Lj3g3v0465930.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Glycine max] gi|356542393|ref|XP_003539651.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 833 | 833 | – | – | |
| ProSiteProfiles | 1 | 88 | 88 | 13.964 | ||
| Gene3D | 2 | 125 | 124 | 2.80E-26 | ||
| SMART | 2 | 103 | 102 | 5.00E-17 | ||
| SUPERFAMILY | 2 | 137 | 136 | 2.14E-24 | ||
| Pfam | 2 | 106 | 105 | 8.20E-19 | ||
| PANTHER | 288 | 922 | 635 | 0 | – | |
| PANTHER | 288 | 922 | 635 | 0 | – | |
| MobiDBLite | 310 | 333 | 24 | – | – | |
| MobiDBLite | 339 | 358 | 20 | – | – | |
| Gene3D | 369 | 500 | 132 | 5.40E-34 | ||
| CDD | 376 | 502 | 127 | 5.50E-64 | – | |
| SMART | 376 | 473 | 98 | 9.10E-19 | ||
| SUPERFAMILY | 376 | 515 | 140 | 1.49E-31 | ||
| Pfam | 376 | 479 | 104 | 3.60E-20 | ||
| ProSiteProfiles | 377 | 458 | 82 | 14.896 | ||
| Gene3D | 534 | 647 | 114 | 9.60E-23 | ||
| Pfam | 538 | 646 | 109 | 8.10E-19 | ||
| SUPERFAMILY | 538 | 695 | 158 | 3.72E-28 | ||
| SMART | 539 | 641 | 103 | 2.90E-10 | ||
| CDD | 539 | 693 | 155 | 9.60E-77 | – | |
| ProSiteProfiles | 540 | 624 | 85 | 11.3 | ||
| Gene3D | 700 | 839 | 140 | 3.00E-27 | ||
| Pfam | 704 | 818 | 115 | 1.30E-21 | ||
| SUPERFAMILY | 704 | 840 | 137 | 3.56E-26 | ||
| SMART | 705 | 815 | 111 | 2.30E-12 | ||
| CDD | 705 | 835 | 131 | 3.25E-67 | – | |
| ProSiteProfiles | 706 | 800 | 95 | 9.124 | ||
| Phobius | 834 | 851 | 18 | – | – | |
| Phobius | 852 | 915 | 64 | – | – | |
| Phobius | 916 | 934 | 19 | – | – | |
| Phobius | 935 | 945 | 11 | – | – | |
| Phobius | 946 | 978 | 33 | – | – | |
| TMHMM | 956 | 978 | 23 | – | – | |
| Pfam | 963 | 1118 | 156 | 2.60E-78 | ||
| Phobius | 979 | 1060 | 82 | – | – | |
| PANTHER | 994 | 1114 | 121 | 0 | – | |
| PANTHER | 994 | 1114 | 121 | 0 | – | |
| TMHMM | 1061 | 1083 | 23 | – | – | |
| Phobius | 1061 | 1090 | 30 | – | – | |
| Phobius | 1091 | 1118 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj3g3v0465930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0465930.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.