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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0489490 |
| Transcript ID | Lj3g3v0489490.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Ferric reductase defective 3a, partial [Medicago truncatula] gi|358348501|ref|XP_003638284.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 202 | 202 | – | – | |
| PANTHER | 2 | 104 | 103 | 1.20E-265 | – | |
| PANTHER | 2 | 104 | 103 | 1.20E-265 | – | |
| CDD | 36 | 496 | 461 | 9.86E-95 | – | |
| TIGRFAM | 46 | 495 | 450 | 9.20E-106 | ||
| Coils | 114 | 134 | 21 | – | – | |
| MobiDBLite | 135 | 193 | 59 | – | – | |
| PANTHER | 187 | 495 | 309 | 1.20E-265 | – | |
| PANTHER | 187 | 495 | 309 | 1.20E-265 | – | |
| Pfam | 192 | 291 | 100 | 8.60E-14 | ||
| TMHMM | 197 | 219 | 23 | – | – | |
| Phobius | 203 | 226 | 24 | – | – | |
| Phobius | 227 | 246 | 20 | – | – | |
| Phobius | 247 | 268 | 22 | – | – | |
| TMHMM | 249 | 268 | 20 | – | – | |
| Phobius | 269 | 273 | 5 | – | – | |
| Phobius | 274 | 296 | 23 | – | – | |
| TMHMM | 275 | 293 | 19 | – | – | |
| Phobius | 297 | 307 | 11 | – | – | |
| TMHMM | 308 | 330 | 23 | – | – | |
| Phobius | 308 | 328 | 21 | – | – | |
| Phobius | 329 | 347 | 19 | – | – | |
| TMHMM | 347 | 369 | 23 | – | – | |
| Phobius | 348 | 369 | 22 | – | – | |
| Pfam | 352 | 495 | 144 | 7.70E-12 | ||
| Phobius | 370 | 380 | 11 | – | – | |
| Phobius | 381 | 402 | 22 | – | – | |
| TMHMM | 384 | 406 | 23 | – | – | |
| Phobius | 403 | 421 | 19 | – | – | |
| Phobius | 422 | 442 | 21 | – | – | |
| TMHMM | 426 | 448 | 23 | – | – | |
| Phobius | 443 | 525 | 83 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v0489490.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0489490.1, powered by CORGI.
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