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Lj3g3v0681740.1

Overview

Field Value
Gene ID Lj3g3v0681740
Transcript ID Lj3g3v0681740.1
Lotus japonicus genome version MG20 v3.0
Description Solute carrier family 35 member E3 [Medicago truncatula] gi|357449677|ref|XP_003595115.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 1 1
Phobius 1 17 17
Phobius 2 13 12
Phobius 14 17 4
Phobius 18 26 9
Phobius 27 47 21
TMHMM 44 66 23
Phobius 48 53 6
Phobius 54 74 21
PANTHER 62 158 97 1.70E-19
PANTHER 62 158 97 1.70E-19
TMHMM 73 95 23
Phobius 75 79 5
Phobius 80 98 19
Phobius 99 104 6
TMHMM 105 122 18
Phobius 105 123 19
Phobius 124 128 5
Phobius 129 148 20
TMHMM 129 148 20
Phobius 149 198 50

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj3g3v0681740.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0681740.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.