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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0730440 |
| Transcript ID | Lj3g3v0730440.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: GPI transamidase component PIG-T-like [Cicer arietinum] gi|502155986|ref|XP_004510269.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 7 | 7 | – | – | |
| SignalP | 1 | 30 | 30 | – | – | |
| SignalP | 1 | 30 | 30 | – | – | |
| PANTHER | 2 | 303 | 302 | 2.30E-272 | – | |
| PANTHER | 2 | 303 | 302 | 2.30E-272 | ||
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 8 | 22 | 15 | – | – | |
| Phobius | 23 | 30 | 8 | – | – | |
| Pfam | 30 | 612 | 583 | 1.90E-178 | ||
| Phobius | 31 | 570 | 540 | – | – | |
| PANTHER | 328 | 660 | 333 | 2.30E-272 | ||
| PANTHER | 328 | 660 | 333 | 2.30E-272 | – | |
| TMHMM | 570 | 592 | 23 | – | – | |
| Phobius | 571 | 592 | 22 | – | – | |
| Phobius | 593 | 637 | 45 | – | – | |
| Phobius | 638 | 660 | 23 | – | – | |
| TMHMM | 638 | 660 | 23 | – | – | |
| Phobius | 661 | 661 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Attachment of GPI anchor to protein | A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain. | ||
| Cellular component | GPI-anchor transamidase complex | An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor. |
Expression pattern of Lj3g3v0730440.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0730440.1, powered by CORGI.
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