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Lj3g3v0824710.1

Overview

Field Value
Gene ID Lj3g3v0824710
Transcript ID Lj3g3v0824710.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein PNS1-like [Glycine max] gi|356539148|ref|XP_003538062.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 56 56
Phobius 1 136 136
MobiDBLite 83 124 42
PANTHER 95 561 467 7.90E-179
PANTHER 95 561 467 7.90E-179
TMHMM 137 159 23
Phobius 137 159 23
Phobius 160 178 19
Phobius 179 198 20
TMHMM 179 198 20
Phobius 199 209 11
TMHMM 210 232 23
Phobius 210 232 23
Phobius 233 237 5
TMHMM 236 258 23
Phobius 238 256 19
Pfam 242 526 285 7.40E-45
Phobius 257 285 29
TMHMM 286 305 20
Phobius 286 304 19
Phobius 305 309 5
TMHMM 309 326 18
Phobius 310 330 21
Phobius 331 459 129
TMHMM 458 480 23
Phobius 460 480 21
Phobius 481 485 5
Phobius 486 503 18
TMHMM 500 522 23
Phobius 504 561 58

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj3g3v0824710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0824710.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.