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Lj3g3v0825030.2

Overview

Field Value
Gene ID Lj3g3v0825030
Transcript ID Lj3g3v0825030.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description S-adenosyl-L-methionine:delta24-sterol-C-methyltransferase [Glycine max] gi|351725990|ref|NP_001238391.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10108
33 297 265 3.00E-199 –
PANTHER
PTHR10108:SF908
33 297 265 3.00E-199 –
SUPERFAMILY
SSF53335
39 270 232 2.98E-50
IPR029063
ProSiteProfiles
PS51685
48 332 285 119.464
IPR030384
Gene3D
G3DSA:3.40.50.150
51 329 279 2.70E-63
IPR029063
CDD
cd02440
97 192 96 1.72E-14 –
Pfam
PF08241
99 196 98 1.40E-20
IPR013216
Pfam
PF08498
271 332 62 6.20E-28
IPR013705

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006694
Biological process Steroid biosynthetic process The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification.
Subterm of
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

Genome browser

LORE1 insertions 31

Expression data

Expression pattern

Expression pattern of Lj3g3v0825030.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0825030.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.