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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR030384
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.713s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0067279.1
n.a. PREDICTED: cycloartenol-C-24-methyltransferase-like [Glycine max] gi|356544297|ref|XP_003540590.1| chr0 23848114 23849775 +
2 domain predictions
1 GO term
Lj1g3v2254700.1
n.a. PREDICTED: 24-methylenesterol C-methyltransferase 2-like [Glycine max] gi|356517628|ref|XP_003527489.1| chr1 26511471 26513663 -
2 domain predictions
1 GO term
Lj1g3v2254710.1
n.a. PREDICTED: 24-methylenesterol C-methyltransferase 2-like [Glycine max] gi|356517628|ref|XP_003527489.1| chr1 26512289 26513663 -
2 domain predictions
1 GO term
Lj1g3v2254710.2
n.a. PREDICTED: 24-methylenesterol C-methyltransferase 2-like [Glycine max] gi|356517628|ref|XP_003527489.1| chr1 26512289 26513663 -
2 domain predictions
1 GO term
Lj1g3v2254710.3
n.a. PREDICTED: 24-methylenesterol C-methyltransferase 2-like [Glycine max] gi|356517628|ref|XP_003527489.1| chr1 26512289 26513663 -
2 domain predictions
1 GO term
Lj3g3v0825030.1
n.a. S-adenosyl-L-methionine:delta24-sterol-C-methyltransferase [Glycine max] gi|351725990|ref|NP_001238391.1| chr3 10391828 10398410 +
2 domain predictions
1 GO term
Lj3g3v0825030.2
n.a. S-adenosyl-L-methionine:delta24-sterol-C-methyltransferase [Glycine max] gi|351725990|ref|NP_001238391.1| chr3 10393312 10398410 +
2 domain predictions
1 GO term
LotjaGi1g1v0432300.1
n.a. Methyltransferase; TAIR: AT1G20330.1 sterol methyltransferase 2; Swiss-Prot: sp|Q39227|SMT2_ARATH 24-methylenesterol C-methyltransferase 2; TrEMBL-Plants: tr|I1K7G0|I1K7G0_SOYBN Methyltransferase; Found in the gene: LotjaGi1g1v0432300 LjG1.1_chr1 92717017 92720316 -
2 domain predictions
1 GO term
LotjaGi3g1v0120400.1
n.a. Methyltransferase; TAIR: AT5G13710.1 sterol methyltransferase 1; Swiss-Prot: sp|Q9LM02|SMT1_ARATH Cycloartenol-C-24-methyltransferase; TrEMBL-Plants: tr|Q43445|Q43445_SOYBN Methyltransferase; Found in the gene: LotjaGi3g1v0120400 LjG1.1_chr3 14744316 14751426 +
2 domain predictions
1 GO term
LotjaGi3g1v0120400.2
n.a. Methyltransferase; TAIR: AT5G13710.1 sterol methyltransferase 1; Swiss-Prot: sp|Q9LM02|SMT1_ARATH Cycloartenol-C-24-methyltransferase; TrEMBL-Plants: tr|Q43445|Q43445_SOYBN Methyltransferase; Found in the gene: LotjaGi3g1v0120400 LjG1.1_chr3 14744316 14751426 +
2 domain predictions
1 GO term
LotjaGi3g1v0548800.1
n.a. Methyltransferase; TAIR: AT5G13710.1 sterol methyltransferase 1; Swiss-Prot: sp|Q9LM02|SMT1_ARATH Cycloartenol-C-24-methyltransferase; TrEMBL-Plants: tr|V4VHY5|V4VHY5_9ROSI Methyltransferase; Found in the gene: LotjaGi3g1v0548800 LjG1.1_chr3 96534119 96540021 -
2 domain predictions
1 GO term