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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0893740 |
| Transcript ID | Lj3g3v0893740.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: siroheme synthase 2-like isoform X1 [Cicer arietinum] gi|502152962|ref|XP_004509171.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 62 | 354 | 293 | 1.80E-90 | – | |
| PANTHER | 62 | 354 | 293 | 1.80E-90 | – | |
| Coils | 78 | 98 | 21 | – | – | |
| SUPERFAMILY | 111 | 349 | 239 | 1.57E-75 | ||
| Gene3D | 112 | 228 | 117 | 9.30E-43 | ||
| TIGRFAM | 113 | 349 | 237 | 1.70E-85 | ||
| Pfam | 115 | 326 | 212 | 3.50E-47 | ||
| CDD | 115 | 348 | 234 | 4.51E-125 | – | |
| ProSitePatterns | 118 | 132 | 15 | – | ||
| ProSitePatterns | 193 | 226 | 34 | – | ||
| Gene3D | 229 | 351 | 123 | 5.60E-41 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. | ||
| Biological process | Siroheme biosynthetic process | The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj3g3v0893740.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0893740.1, powered by CORGI.
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