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Lj3g3v0937830.1

Overview

Field Value
Gene ID Lj3g3v0937830
Transcript ID Lj3g3v0937830.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein kinase G11A-like [Cicer arietinum] gi|502087659|ref|XP_004488602.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 165 165 – –
PANTHER
PTHR24351
142 341 200 5.80E-289 –
PANTHER
PTHR24351:SF55
142 341 200 5.80E-289 –
Gene3D
G3DSA:3.30.200.20
180 267 88 8.20E-25 –
SUPERFAMILY
SSF56112
182 334 153 3.46E-81
IPR011009
CDD
cd05574
183 539 357 5.57E-180 –
ProSiteProfiles
PS50011
185 518 334 44.357
IPR000719
SMART
SM00220
185 518 334 7.90E-87
IPR000719
Pfam
PF00069
186 339 154 5.10E-37
IPR000719
Gene3D
G3DSA:1.10.510.10
268 333 66 1.30E-59 –
ProSitePatterns
PS00108
306 318 13 –
IPR008271
MobiDBLite
mobidb-lite
343 381 39 – –
SUPERFAMILY
SSF56112
408 543 136 3.46E-81
IPR011009
Gene3D
G3DSA:1.10.510.10
408 571 164 1.30E-59 –
PANTHER
PTHR24351:SF55
409 568 160 5.80E-289 –
PANTHER
PTHR24351
409 568 160 5.80E-289 –
Pfam
PF00069
412 518 107 2.80E-21
IPR000719
MobiDBLite
mobidb-lite
541 581 41 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj3g3v0937830.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0937830.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.