Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj3g3v1124760.1

Overview

Field Value
Gene ID Lj3g3v1124760
Transcript ID Lj3g3v1124760.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase SRPK1-like [Glycine max] gi|356543526|ref|XP_003540211.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 21 21 – –
PANTHER
PTHR24055
1 185 185 1.70E-193 –
PANTHER
PTHR24055:SF228
1 185 185 1.70E-193 –
Gene3D
G3DSA:3.30.200.20
26 122 97 3.60E-35 –
CDD
cd14136
31 376 346 1.52E-123 –
SUPERFAMILY
SSF56112
38 185 148 1.02E-58
IPR011009
Pfam
PF00069
42 181 140 9.20E-20
IPR000719
SMART
SM00220
42 377 336 2.20E-13
IPR000719
ProSiteProfiles
PS50011
42 378 337 25.446
IPR000719
ProSitePatterns
PS00107
48 71 24 –
IPR017441
Gene3D
G3DSA:1.10.510.10
123 221 99 1.10E-38 –
ProSitePatterns
PS00108
169 181 13 –
IPR008271
MobiDBLite
mobidb-lite
182 312 131 – –
Gene3D
G3DSA:1.10.510.10
313 376 64 1.10E-38 –
SUPERFAMILY
SSF56112
317 376 60 1.02E-58
IPR011009
Pfam
PF00069
317 375 59 4.90E-10
IPR000719
PANTHER
PTHR24055
321 375 55 1.70E-193 –
PANTHER
PTHR24055:SF228
321 375 55 1.70E-193 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj3g3v1124760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v1124760.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.