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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1308420 |
| Transcript ID | Lj3g3v1308420.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356543710|ref|XP_003540303.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | – | – | |
| PANTHER | 10 | 97 | 88 | 1.90E-54 | – | |
| PANTHER | 10 | 97 | 88 | 1.90E-54 | – | |
| Pfam | 10 | 100 | 91 | 1.60E-17 | ||
| Phobius | 25 | 50 | 26 | – | – | |
| TMHMM | 27 | 49 | 23 | – | – | |
| Phobius | 51 | 135 | 85 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v1308420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1308420.1, powered by CORGI.
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