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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1314810 |
| Transcript ID | Lj3g3v1314810.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: protein TRANSPARENT TESTA 12-like [Glycine max] gi|356544808|ref|XP_003540839.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 56 | 56 | – | – | |
| PANTHER | 19 | 507 | 489 | 0 | – | |
| PANTHER | 19 | 507 | 489 | 0 | – | |
| CDD | 54 | 490 | 437 | 2.18E-173 | – | |
| Phobius | 57 | 75 | 19 | – | – | |
| TMHMM | 57 | 79 | 23 | – | – | |
| TIGRFAM | 64 | 461 | 398 | 6.50E-91 | ||
| Pfam | 64 | 224 | 161 | 2.70E-35 | ||
| Phobius | 76 | 140 | 65 | – | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| TMHMM | 141 | 163 | 23 | – | – | |
| Phobius | 141 | 164 | 24 | – | – | |
| Phobius | 165 | 169 | 5 | – | – | |
| TMHMM | 168 | 190 | 23 | – | – | |
| Phobius | 170 | 191 | 22 | – | – | |
| Phobius | 192 | 202 | 11 | – | – | |
| TMHMM | 202 | 224 | 23 | – | – | |
| Phobius | 203 | 225 | 23 | – | – | |
| Phobius | 226 | 230 | 5 | – | – | |
| Phobius | 231 | 256 | 26 | – | – | |
| TMHMM | 234 | 256 | 23 | – | – | |
| Phobius | 257 | 281 | 25 | – | – | |
| Phobius | 282 | 304 | 23 | – | – | |
| TMHMM | 285 | 307 | 23 | – | – | |
| Pfam | 286 | 446 | 161 | 1.10E-32 | ||
| Phobius | 305 | 315 | 11 | – | – | |
| Phobius | 316 | 337 | 22 | – | – | |
| TMHMM | 322 | 344 | 23 | – | – | |
| Phobius | 338 | 357 | 20 | – | – | |
| TMHMM | 356 | 378 | 23 | – | – | |
| Phobius | 358 | 383 | 26 | – | – | |
| Phobius | 384 | 402 | 19 | – | – | |
| Phobius | 403 | 422 | 20 | – | – | |
| Phobius | 423 | 428 | 6 | – | – | |
| Phobius | 429 | 453 | 25 | – | – | |
| TMHMM | 430 | 452 | 23 | – | – | |
| Phobius | 454 | 458 | 5 | – | – | |
| Phobius | 459 | 480 | 22 | – | – | |
| TMHMM | 459 | 481 | 23 | – | – | |
| Phobius | 481 | 507 | 27 | – | – | |
| Coils | 481 | 507 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v1314810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1314810.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.