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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1393590 |
| Transcript ID | Lj3g3v1393590.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max] gi|356506506|ref|XP_003522022.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 18 | 18 | – | – | |
| Phobius | 1 | 22 | 22 | – | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| SUPERFAMILY | 16 | 219 | 204 | 3.41E-37 | – | |
| Gene3D | 17 | 243 | 227 | 2.30E-47 | ||
| Phobius | 18 | 22 | 5 | – | – | |
| Phobius | 23 | 386 | 364 | – | – | |
| PANTHER | 24 | 304 | 281 | 1.50E-168 | – | |
| SMART | 24 | 48 | 25 | 330 | ||
| PANTHER | 24 | 304 | 281 | 1.50E-168 | – | |
| SMART | 49 | 74 | 26 | 15 | ||
| Pfam | 75 | 98 | 24 | 0.16 | ||
| SMART | 75 | 100 | 26 | 0.0031 | ||
| SMART | 101 | 126 | 26 | 21 | ||
| Pfam | 126 | 149 | 24 | 2.60E-05 | ||
| SMART | 127 | 150 | 24 | 170 | ||
| SMART | 151 | 176 | 26 | 3.7 | ||
| SMART | 177 | 202 | 26 | 0.0063 | ||
| SUPERFAMILY | 177 | 338 | 162 | 3.14E-22 | – | |
| Pfam | 177 | 200 | 24 | 0.7 | ||
| SMART | 203 | 228 | 26 | 0.047 | ||
| Pfam | 227 | 251 | 25 | 1.5 | ||
| SMART | 229 | 253 | 25 | 33 | ||
| Gene3D | 244 | 340 | 97 | 1.50E-10 | ||
| SMART | 254 | 279 | 26 | 5.7 | ||
| SMART | 280 | 304 | 25 | 11 | ||
| Pfam | 281 | 302 | 22 | 0.4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v1393590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1393590.1, powered by CORGI.
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