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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1507220 |
| Transcript ID | Lj3g3v1507220.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Vesicle docking involved in exocytosis isoform 1 [Theobroma cacao] gi|508700976|gb|EOX92872.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 198 | 338 | 141 | 1.83E-05 | ||
| PANTHER | 206 | 354 | 149 | 6.40E-133 | ||
| PANTHER | 206 | 354 | 149 | 6.40E-133 | – | |
| Gene3D | 220 | 389 | 170 | 1.40E-32 | ||
| MobiDBLite | 352 | 378 | 27 | – | – | |
| PANTHER | 418 | 573 | 156 | 6.40E-133 | – | |
| PANTHER | 418 | 573 | 156 | 6.40E-133 | ||
| Pfam | 570 | 854 | 285 | 7.40E-06 | ||
| PANTHER | 595 | 729 | 135 | 6.40E-133 | – | |
| PANTHER | 595 | 729 | 135 | 6.40E-133 | ||
| Coils | 648 | 668 | 21 | – | – | |
| MobiDBLite | 661 | 702 | 42 | – | – | |
| PANTHER | 769 | 857 | 89 | 6.40E-133 | – | |
| PANTHER | 769 | 857 | 89 | 6.40E-133 | ||
| SUPERFAMILY | 776 | 856 | 81 | 6.54E-11 | ||
| Gene3D | 807 | 856 | 50 | 1.40E-32 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Vesicle docking involved in exocytosis | The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
Expression pattern of Lj3g3v1507220.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1507220.1, powered by CORGI.
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