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Lj3g3v1517520.1

Overview

Field Value
Gene ID Lj3g3v1517520
Transcript ID Lj3g3v1517520.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP]-forming] gi|356543102|ref|XP_003540002.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10788
1 845 845 0 –
PANTHER
PTHR10788:SF18
1 845 845 0 –
Gene3D
G3DSA:3.40.50.2000
62 319 258 1.30E-91 –
SUPERFAMILY
SSF53756
63 550 488 1.95E-149 –
CDD
cd03788
63 546 484 0
IPR001830
Pfam
PF00982
63 546 484 4.30E-179
IPR001830
Gene3D
G3DSA:3.40.50.2000
320 531 212 6.30E-74 –
TIGRFAM
TIGR00685
592 841 250 1.50E-35
IPR003337
Gene3D
G3DSA:3.40.50.1000
593 667 75 4.80E-42
IPR023214
SUPERFAMILY
SSF56784
593 841 249 2.82E-45
IPR023214
TIGRFAM
TIGR01484
595 800 206 5.30E-17
IPR006379
Pfam
PF02358
596 829 234 2.60E-72
IPR003337
Gene3D
G3DSA:3.40.50.1000
749 845 97 4.80E-42
IPR023214

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0005992
Biological process Trehalose biosynthetic process The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi.
Subterm of

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj3g3v1517520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v1517520.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.