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Lj3g3v1665690.1

Overview

Field Value
Gene ID Lj3g3v1665690
Transcript ID Lj3g3v1665690.1
Lotus japonicus genome version MG20 v3.0
Description Ripening-related protein-like hydrolase-like protein [Medicago truncatula] gi|357454203|ref|XP_003597382.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12725
1 150 150 1.30E-162 –
PANTHER
PTHR12725:SF72
1 150 150 1.30E-162 –
TIGRFAM
TIGR01993
16 239 224 4.80E-63
IPR010237
SUPERFAMILY
SSF56784
17 150 134 8.14E-26
IPR023214
Gene3D
G3DSA:3.40.50.1000
91 150 60 1.30E-26
IPR023214
CDD
cd01427
114 239 126 3.51E-08 –
TIGRFAM
TIGR01509
191 239 49 1.30E-13
IPR006439
PANTHER
PTHR12725
193 281 89 1.30E-162 –
PANTHER
PTHR12725:SF72
193 281 89 1.30E-162 –
SUPERFAMILY
SSF56784
194 243 50 8.14E-26
IPR023214
Gene3D
G3DSA:3.40.50.1000
194 243 50 1.30E-26
IPR023214
Pfam
PF13242
196 248 53 5.40E-05 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj3g3v1665690.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v1665690.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.