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Lj3g3v1953380.1

Overview

Field Value
Gene ID Lj3g3v1953380
Transcript ID Lj3g3v1953380.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase KIPK-like [Glycine max] gi|356515408|ref|XP_003526392.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 198 220 23
MobiDBLite 247 271 25
MobiDBLite 302 367 66
PANTHER 375 606 232 4.40E-297
PANTHER 375 606 232 4.40E-297
MobiDBLite 381 426 46
SUPERFAMILY 426 597 172 1.14E-80
Gene3D 438 515 78 1.60E-19
CDD 448 807 360 8.96E-171
ProSiteProfiles 450 784 335 44.4
SMART 450 784 335 5.10E-86
Pfam 451 601 151 3.60E-36
Gene3D 516 600 85 6.00E-61
ProSitePatterns 571 583 13
SUPERFAMILY 672 803 132 1.14E-80
PANTHER 675 807 133 4.40E-297
PANTHER 675 807 133 4.40E-297
Gene3D 676 790 115 6.00E-61
Pfam 681 784 104 1.70E-20

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj3g3v1953380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v1953380.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.