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Lj3g3v2062810.1

Overview

Field Value
Gene ID Lj3g3v2062810
Transcript ID Lj3g3v2062810.1
Lotus japonicus genome version MG20 v3.0
Description Heat shock protein 70B [Theobroma cacao] gi|508778858|gb|EOY26114.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Pfam
PF00012
1 555 555 8.00E-233
IPR013126
PANTHER
PTHR19375
1 592 592 0 –
SUPERFAMILY
SSF53067
1 128 128 3.17E-44 –
PANTHER
PTHR19375:SF229
1 592 592 0 –
Gene3D
G3DSA:3.30.30.30
8 53 46 7.50E-30 –
Gene3D
G3DSA:3.30.420.40
54 143 90 2.50E-48 –
PRINTS
PR00301
83 103 21 2.20E-65
IPR013126
SUPERFAMILY
SSF53067
134 325 192 9.26E-70 –
ProSitePatterns
PS00329
140 153 14 –
IPR018181
Gene3D
G3DSA:3.30.420.40
144 173 30 3.30E-39 –
PRINTS
PR00301
146 156 11 2.20E-65
IPR013126
Gene3D
G3DSA:3.90.640.10
174 254 81 2.10E-39 –
Gene3D
G3DSA:3.30.420.40
259 302 44 3.30E-39 –
PRINTS
PR00301
274 290 17 2.20E-65
IPR013126
ProSitePatterns
PS01036
277 291 15 –
IPR018181
PRINTS
PR00301
306 326 21 2.20E-65
IPR013126
SUPERFAMILY
SSF100920
330 486 157 3.14E-64
IPR029047
PRINTS
PR00301
333 352 20 2.20E-65
IPR013126
Gene3D
G3DSA:2.60.34.10
335 461 127 2.00E-67
IPR029047
PRINTS
PR00301
414 430 17 2.20E-65
IPR013126
Coils
Coil
455 478 24 – –
Gene3D
G3DSA:1.20.1270.10
462 566 105 2.80E-44
IPR029048
SUPERFAMILY
SSF100934
480 559 80 5.49E-32
IPR029048
Coils
Coil
525 545 21 – –
MobiDBLite
mobidb-lite
564 592 29 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj3g3v2062810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2062810.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.