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Lj3g3v2064840.1

Overview

Field Value
Gene ID Lj3g3v2064840
Transcript ID Lj3g3v2064840.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: chaperone protein dnaJ 8, chloroplastic-like [Glycine max] gi|356523203|ref|XP_003530231.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF46565
42 140 99 2.18E-18
IPR001623
Gene3D
G3DSA:1.10.287.110
43 98 56 1.00E-16
IPR001623
PANTHER
PTHR24078
45 96 52 1.30E-14 –
SMART
SM00271
45 102 58 5.10E-18
IPR001623
CDD
cd06257
46 96 51 1.64E-16
IPR001623
ProSiteProfiles
PS50076
46 112 67 13.557
IPR001623
Pfam
PF00226
46 98 53 7.20E-15
IPR001623
PRINTS
PR00625
48 66 19 2.20E-09
IPR001623
PRINTS
PR00625
66 81 16 2.20E-09
IPR001623
PRINTS
PR00625
82 102 21 2.20E-09
IPR001623

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj3g3v2064840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2064840.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.