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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2172640 |
| Transcript ID | Lj3g3v2172640.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: topless-related protein 1-like [Glycine max] gi|356522325|ref|XP_003529797.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 22 | 456 | 435 | 5.80E-255 | ||
| PANTHER | 22 | 456 | 435 | 5.80E-255 | – | |
| Gene3D | 69 | 423 | 355 | 6.40E-35 | ||
| SMART | 155 | 192 | 38 | 270 | ||
| SUPERFAMILY | 165 | 423 | 259 | 6.64E-38 | ||
| SMART | 195 | 235 | 41 | 2.6 | ||
| ProSiteProfiles | 202 | 286 | 85 | 14.872 | ||
| SMART | 238 | 277 | 40 | 8.90E-07 | ||
| Pfam | 244 | 277 | 34 | 1.60E-04 | ||
| ProSiteProfiles | 245 | 286 | 42 | 12.747 | ||
| ProSitePatterns | 264 | 278 | 15 | – | ||
| SMART | 330 | 370 | 41 | 13 | ||
| SMART | 383 | 422 | 40 | 25 | ||
| MobiDBLite | 426 | 458 | 33 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj3g3v2172640.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2172640.1, powered by CORGI.
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