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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2261380 |
| Transcript ID | Lj3g3v2261380.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable sulfate transporter 3.4-like [Glycine max] gi|356522172|ref|XP_003529722.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 66 | 66 | – | – | |
| PANTHER | 3 | 654 | 652 | 0 | ||
| PANTHER | 3 | 654 | 652 | 0 | ||
| Phobius | 67 | 85 | 19 | – | – | |
| TIGRFAM | 80 | 643 | 564 | 7.70E-179 | ||
| Phobius | 86 | 90 | 5 | – | – | |
| Phobius | 91 | 108 | 18 | – | – | |
| Pfam | 93 | 472 | 380 | 3.60E-123 | ||
| Phobius | 109 | 119 | 11 | – | – | |
| Phobius | 120 | 139 | 20 | – | – | |
| Phobius | 140 | 144 | 5 | – | – | |
| Phobius | 145 | 161 | 17 | – | – | |
| Phobius | 162 | 172 | 11 | – | – | |
| Phobius | 173 | 197 | 25 | – | – | |
| TMHMM | 173 | 195 | 23 | – | – | |
| Phobius | 198 | 202 | 5 | – | – | |
| Phobius | 203 | 222 | 20 | – | – | |
| TMHMM | 210 | 232 | 23 | – | – | |
| Phobius | 223 | 228 | 6 | – | – | |
| Phobius | 229 | 248 | 20 | – | – | |
| Phobius | 249 | 253 | 5 | – | – | |
| TMHMM | 253 | 272 | 20 | – | – | |
| Phobius | 254 | 271 | 18 | – | – | |
| Phobius | 272 | 282 | 11 | – | – | |
| TMHMM | 282 | 304 | 23 | – | – | |
| Phobius | 283 | 301 | 19 | – | – | |
| Phobius | 302 | 334 | 33 | – | – | |
| TMHMM | 335 | 357 | 23 | – | – | |
| Phobius | 335 | 357 | 23 | – | – | |
| Phobius | 358 | 410 | 53 | – | – | |
| TMHMM | 377 | 399 | 23 | – | – | |
| Phobius | 411 | 432 | 22 | – | – | |
| TMHMM | 412 | 434 | 23 | – | – | |
| Phobius | 433 | 437 | 5 | – | – | |
| Phobius | 438 | 456 | 19 | – | – | |
| TMHMM | 439 | 461 | 23 | – | – | |
| Phobius | 457 | 467 | 11 | – | – | |
| Phobius | 468 | 496 | 29 | – | – | |
| TMHMM | 468 | 490 | 23 | – | – | |
| Phobius | 497 | 530 | 34 | – | – | |
| ProSiteProfiles | 524 | 647 | 124 | 26.292 | ||
| CDD | 525 | 640 | 116 | 1.17E-20 | – | |
| Gene3D | 525 | 640 | 116 | 5.70E-21 | ||
| Pfam | 526 | 643 | 118 | 2.50E-28 | ||
| SUPERFAMILY | 529 | 646 | 118 | 1.26E-18 | ||
| Phobius | 531 | 551 | 21 | – | – | |
| Phobius | 552 | 655 | 104 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v2261380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2261380.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.