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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2517500 |
| Transcript ID | Lj3g3v2517500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: vacuolar protein sorting-associated protein 8 homolog [Glycine max] gi|356522472|ref|XP_003529870.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 80 | 80 | 4.40E-14 | ||
| Coils | 100 | 120 | 21 | – | – | |
| PANTHER | 203 | 343 | 141 | 2.00E-48 | – | |
| PANTHER | 203 | 343 | 141 | 2.00E-48 | – | |
| Pfam | 367 | 461 | 95 | 1.30E-07 | ||
| PANTHER | 387 | 464 | 78 | 2.00E-48 | – | |
| PANTHER | 387 | 464 | 78 | 2.00E-48 | – | |
| PANTHER | 496 | 544 | 49 | 2.00E-48 | – | |
| PANTHER | 496 | 544 | 49 | 2.00E-48 | – | |
| PANTHER | 577 | 745 | 169 | 2.00E-48 | – | |
| PANTHER | 577 | 745 | 169 | 2.00E-48 | – | |
| SUPERFAMILY | 673 | 728 | 56 | 3.25E-06 | – | |
| ProSiteProfiles | 679 | 727 | 49 | 9.509 | ||
| SMART | 679 | 727 | 49 | 0.0056 | ||
| MobiDBLite | 825 | 851 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
Expression pattern of Lj3g3v2517500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2517500.3, powered by CORGI.
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