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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 1020 results. Now displaying 1 of 21 with 50 rows per page. This search has taken 5.666s to perform.
| Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
|---|---|---|---|---|---|---|---|---|
| LjAstray | bZIP with a Ring-finger motif [Lotus japonicus] gi|23496517|dbj|BAC20318.1| | chr6 | 10518286 | 10524467 | - | – | ||
| n.a. | E3 ubiquitin ligase-like protein, partial [Lotus japonicus] gi|379055947|emb|CCG06555.1| | chr0 | 3671095 | 3674611 | + | – | ||
| n.a. | PREDICTED: cellulose synthase-like protein D4-like [Glycine max] gi|356501469|ref|XP_003519547.1| | chr0 | 8948552 | 8955587 | - | – | ||
| n.a. | CCR4-NOT transcription complex subunit [Medicago truncatula] gi|357453719|ref|XP_003597140.1| | chr0 | 12097335 | 12105611 | - | – | ||
| n.a. | CCR4-NOT transcription complex subunit [Medicago truncatula] gi|357453719|ref|XP_003597140.1| | chr0 | 12097335 | 12105611 | - | – | ||
| n.a. | MTD2 [Medicago truncatula] gi|9294812|gb|AAF86688.1| | chr0 | 12328670 | 12331133 | - | – | ||
| n.a. | PREDICTED: RING-box protein 1a-like [Glycine max] gi|356517622|ref|XP_003527486.1| | chr0 | 14005942 | 14009318 | + | – | ||
| n.a. | PHD and RING finger domain-containing protein [Medicago truncatula] gi|357511785|ref|XP_003626181.1| | chr0 | 20004399 | 20008108 | - | – | ||
| n.a. | PREDICTED: RING-H2 finger protein ATL46-like [Glycine max] gi|356526834|ref|XP_003532021.1| | chr0 | 25793274 | 25794924 | + | – | ||
| n.a. | PREDICTED: RING-H2 finger protein ATL46-like [Glycine max] gi|356526834|ref|XP_003532021.1| | chr0 | 25793274 | 25794924 | + | – | ||
| n.a. | Ring 1b [Theobroma cacao] gi|508707572|gb|EOX99468.1| | chr0 | 27417683 | 27425098 | - | – | ||
| n.a. | RING finger protein [Medicago truncatula] gi|357521767|ref|XP_003607649.1| | chr0 | 28819135 | 28821066 | - | – | ||
| n.a. | RING finger protein [Medicago truncatula] gi|357521767|ref|XP_003607649.1| | chr0 | 28819135 | 28821066 | - | – | ||
| n.a. | Putative mandelonitrile lyase, related [Solanum demissum] gi|53749466|gb|AAU90320.1| | chr0 | 28996388 | 28999499 | + | – | ||
| n.a. | PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Solanum lycopersicum] gi|460364892|ref|XP_004228343.1| | chr0 | 31922225 | 31922843 | + | – | ||
| n.a. | PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus] gi|449441410|ref|XP_004138475.1| | chr0 | 32829041 | 32836121 | + | – | ||
| n.a. | PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus] gi|449441410|ref|XP_004138475.1| | chr0 | 32829041 | 32836121 | + | – | ||
| n.a. | PREDICTED: RING-H2 finger protein ATL73-like [Cicer arietinum] gi|502141813|ref|XP_004504651.1| | chr0 | 32852281 | 32853311 | - | – | ||
| n.a. | IBR domain containing protein [Medicago truncatula] gi|357472415|ref|XP_003606492.1| | chr0 | 41257870 | 41261433 | + | – | ||
| n.a. | RING/U-box superfamily protein [Theobroma cacao] gi|508787285|gb|EOY34541.1| | chr0 | 41718547 | 41719183 | - | – | ||
| n.a. | PREDICTED: E3 ubiquitin-protein ligase ATL4-like isoform X1 [Cicer arietinum] gi|502134404|ref|XP_004502107.1| | chr0 | 42864169 | 42866036 | - | – | ||
| n.a. | PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Glycine max] gi|356527906|ref|XP_003532547.1| | chr0 | 43124517 | 43127956 | + | – | ||
| n.a. | RING/U-box superfamily protein isoform 3 [Theobroma cacao] gi|508721612|gb|EOY13509.1| | chr0 | 44546354 | 44550016 | - | – | ||
| n.a. | RING/U-box superfamily protein isoform 4 [Theobroma cacao] gi|508721613|gb|EOY13510.1| | chr0 | 44546354 | 44550016 | - | – | ||
| n.a. | RING finger family protein [Medicago truncatula] gi|357470167|ref|XP_003605368.1| | chr0 | 45532593 | 45536253 | - | – | ||
| n.a. | PREDICTED: RING-H2 finger protein ATL54-like [Glycine max] gi|356551725|ref|XP_003544224.1| | chr0 | 46121629 | 46123407 | - | – | ||
| n.a. | E3 ubiquitin-protein ligase RNF19A [Medicago truncatula] gi|357489519|ref|XP_003615047.1| | chr0 | 46491473 | 46503911 | - | – | ||
| n.a. | RING-H2 finger protein ATL5F [Medicago truncatula] gi|357517389|ref|XP_003628983.1| | chr0 | 48177433 | 48177972 | + | – | ||
| n.a. | E3 ubiquitin ligase-like protein [Lotus japonicus] gi|379055943|emb|CCG06553.1| | chr0 | 49998594 | 50001449 | - | – | ||
| n.a. | PREDICTED: E3 ubiquitin-protein ligase COP1-like [Glycine max] gi|356554527|ref|XP_003545597.1| | chr0 | 50026700 | 50038584 | + | – | ||
| n.a. | Mandelonitrile lyase [Medicago truncatula] gi|357514913|ref|XP_003627745.1| | chr0 | 50586175 | 50591090 | - | – | ||
| n.a. | PREDICTED: cell wall protein AWA1-like isoform X1 [Cicer arietinum] gi|502132152|ref|XP_004501243.1| | chr0 | 58421215 | 58425490 | - | – | ||
| n.a. | PREDICTED: cell wall protein AWA1-like isoform X1 [Cicer arietinum] gi|502132152|ref|XP_004501243.1| | chr0 | 58421215 | 58425490 | - | – | ||
| n.a. | PREDICTED: RING-H2 finger protein ATL67-like [Cicer arietinum] gi|502105458|ref|XP_004492810.1| | chr0 | 60866808 | 60870154 | - | – | ||
| n.a. | PREDICTED: probable E3 ubiquitin-protein ligase LUL3-like [Cicer arietinum] gi|502079081|ref|XP_004486148.1| | chr0 | 62447557 | 62448692 | - | – | ||
| n.a. | Zinc finger protein-related isoform 1 [Theobroma cacao] gi|508708206|gb|EOY00103.1| | chr0 | 76414002 | 76423289 | + | – | ||
| n.a. | Zinc finger protein-related isoform 1 [Theobroma cacao] gi|508708206|gb|EOY00103.1| | chr0 | 76414002 | 76424433 | + | – | ||
| n.a. | PREDICTED: RING-H2 finger protein ATL63-like [Cicer arietinum] gi|502129815|ref|XP_004500434.1| | chr0 | 78574931 | 78577138 | - | – | ||
| n.a. | PREDICTED: RING-H2 finger protein ATL63-like [Cicer arietinum] gi|502129815|ref|XP_004500434.1| | chr0 | 78574931 | 78577138 | - | – | ||
| n.a. | PREDICTED: RING-H2 finger protein ATL80-like [Cicer arietinum] gi|502153789|ref|XP_004509462.1| | chr0 | 81506648 | 81508860 | - | – | ||
| n.a. | PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Cicer arietinum] gi|502151848|ref|XP_004508643.1| | chr0 | 82287617 | 82289684 | - | – | ||
| n.a. | Baculoviral IAP repeat-containing protein [Medicago truncatula] gi|357437787|ref|XP_003589169.1| | chr0 | 83762224 | 83764788 | - | – | ||
| n.a. | Zinc finger protein [Medicago truncatula] gi|357437777|ref|XP_003589164.1| | chr0 | 83777629 | 83783971 | - | – | ||
| n.a. | Zinc finger, RING-type; Transcription factor jumonji, jmjC; Zinc finger, C2H2-type [Medicago truncatula] gi|124359679|gb|ABN06047.1| | chr0 | 89250780 | 89252509 | - | – | ||
| n.a. | Zinc finger-like protein [Medicago truncatula] gi|357513375|ref|XP_003626976.1| | chr0 | 95631873 | 95632244 | + | – | ||
| n.a. | RING-H2 finger protein ATL1L [Medicago truncatula] gi|357519845|ref|XP_003630211.1| | chr0 | 96761542 | 96761995 | - | – | ||
| n.a. | n.a. | chr0 | 96769305 | 96773579 | - | – | ||
| n.a. | RING-H2 finger protein [Medicago truncatula] gi|357463243|ref|XP_003601903.1| | chr0 | 98783642 | 98784283 | - | – | ||
| n.a. | Hop-interacting protein THI012 [Solanum lycopersicum] gi|365222866|gb|AEW69785.1| | chr0 | 102661033 | 102663550 | - | – | ||
| n.a. | RING finger protein [Medicago truncatula] gi|357521767|ref|XP_003607649.1| | chr0 | 107336419 | 107336908 | - | – |