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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2576300 |
| Transcript ID | Lj3g3v2576300.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nuclear pore complex protein Nup107-like [Glycine max] gi|356519905|ref|XP_003528609.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 47 | 47 | – | – | |
| PANTHER | 1 | 232 | 232 | 2.40E-247 | ||
| Coils | 73 | 93 | 21 | – | – | |
| Pfam | 197 | 899 | 703 | 6.00E-64 | ||
| PANTHER | 252 | 489 | 238 | 2.40E-247 | ||
| PANTHER | 507 | 858 | 352 | 2.40E-247 | ||
| PANTHER | 892 | 959 | 68 | 2.40E-247 | ||
| PANTHER | 1019 | 1113 | 95 | 2.40E-247 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nuclear pore | Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined. | ||
| Molecular function | Structural constituent of nuclear pore | The action of a molecule that contributes to the structural integrity of the nuclear pore complex, a protein-lined channel in the nuclear envelope that allows the transfer of macromolecules. |
Expression pattern of Lj3g3v2576300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2576300.1, powered by CORGI.
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