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GO:0005643

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description Nuclear pore
Full defintion Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
Subterm of

Relationships

The relationship of GO:0005643 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
ISBN

· ISBN: 0198547684

, · pages

Associated Lotus transcripts 46

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0125289.1
– PREDICTED: nuclear pore complex protein Nup205-like isoform X2 [Cicer arietinum] gi|502172049|ref|XP_004515149.1|
GO terms
1
Lj0g3v0125289.2
– PREDICTED: nuclear pore complex protein Nup205-like isoform X1 [Cicer arietinum] gi|502172044|ref|XP_004515148.1|
GO terms
1
Lj0g3v0235929.1
– PREDICTED: nucleoporin GLE1-like [Cicer arietinum] gi|502135579|ref|XP_004502381.1|
GO terms
2
Lj0g3v0246169.1
– PREDICTED: brefeldin A resistance protein-like [Glycine max] gi|356556006|ref|XP_003546318.1|
GO terms
1
Lj0g3v0314209.1
– Nucleoporin GLE1 [Medicago truncatula] gi|357463209|ref|XP_003601886.1|
GO terms
2
Lj0g3v0314209.2
– PREDICTED: nucleoporin GLE1-like [Cicer arietinum] gi|502135579|ref|XP_004502381.1|
GO terms
2
Lj1g3v0683870.1
– PREDICTED: nuclear pore complex protein Nup107-like [Glycine max] gi|356519905|ref|XP_003528609.1|
GO terms
2
Lj1g3v2124920.1
– PREDICTED: nuclear pore complex protein Nup155-like [Glycine max] gi|356524549|ref|XP_003530891.1|
GO terms
3
Lj1g3v2124920.2
– PREDICTED: nuclear pore complex protein Nup155-like [Cicer arietinum] gi|502138295|ref|XP_004503352.1|
GO terms
3
Lj1g3v3446330.1
– Nuclear pore complex protein Nup54 [Medicago truncatula] gi|357463049|ref|XP_003601806.1|
GO terms
1
Lj2g3v1828890.1
– PREDICTED: serine-rich adhesin for platelets-like [Cicer arietinum] gi|502160987|ref|XP_004511979.1|
GO terms
4
Lj2g3v3339160.1
– PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Glycine max] gi|356551432|ref|XP_003544079.1|
GO terms
3
Lj3g3v0043080.1
– Nucleoporin interacting component (Nup93/Nic96-like) family protein isoform 1 [Theobroma cacao] gi|508717303|gb|EOY09200.1|
GO terms
2
Lj3g3v0075720.1
– Nucleoporin interacting component (Nup93/Nic96-like) family protein isoform 1 [Theobroma cacao] gi|508717303|gb|EOY09200.1|
GO terms
2
Lj3g3v0139590.1
– PREDICTED: brefeldin A resistance protein-like [Glycine max] gi|356556006|ref|XP_003546318.1|
GO terms
1
Lj3g3v2576300.1
– PREDICTED: nuclear pore complex protein Nup107-like [Glycine max] gi|356519905|ref|XP_003528609.1|
GO terms
2
Lj4g3v0654690.1
– PREDICTED: nucleoporin GLE1-like [Cicer arietinum] gi|502135579|ref|XP_004502381.1|
GO terms
2
Lj4g3v0654690.2
– PREDICTED: nucleoporin GLE1-like [Cicer arietinum] gi|502135579|ref|XP_004502381.1|
GO terms
2
Lj4g3v3113120.1
– PREDICTED: nuclear pore complex protein Nup155-like [Glycine max] gi|356524549|ref|XP_003530891.1|
GO terms
3
Lj5g3v1264020.1
– PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1 [Glycine max] gi|356549598|ref|XP_003543179.1|
GO terms
3
LotjaGi1g1v0006600.1
– Nuclear pore complex protein NUP96; TAIR: AT1G80680.1 SUPPRESSOR OF AUXIN RESISTANCE 3; Swiss-Prot: sp|Q8LLD0|NUP96_ARATH Nuclear pore complex protein NUP96; TrEMBL-Plants: tr|I1M679|I1M679_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0006600
GO terms
3
LotjaGi1g1v0420500_LC.1
– Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr|I1KQB7|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0420500_LC
GO terms
3
LotjaGi1g1v0420500_LC.2
– Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr|I1KQB7|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0420500_LC
GO terms
3
LotjaGi1g1v0420500_LC.3
– Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr|I1KQB7|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0420500_LC
GO terms
3
LotjaGi1g1v0420500_LC.4
– Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr|I1KQB7|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0420500_LC
GO terms
3
LotjaGi1g1v0420500_LC.5
– Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr|I1KQB7|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0420500_LC
GO terms
3
LotjaGi1g1v0420500_LC.6
– Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr|I1KQB7|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0420500_LC
GO terms
3
LotjaGi1g1v0420500_LC.7
– Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr|I1KQB7|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0420500_LC
GO terms
3
LotjaGi1g1v0580200.1
– Nuclear pore complex protein Nup54; TAIR: AT1G24310.1 nuclear pore complex protein; Swiss-Prot: sp|Q8GYF7|NUP54_ARATH Nuclear pore complex protein NUP54; TrEMBL-Plants: tr|A0A0B2QWA7|A0A0B2QWA7_GLYSO Nuclear pore complex protein Nup54; Found in the gene: LotjaGi1g1v0580200
GO terms
1
LotjaGi1g1v0600000.1
– Nuclear pore complex protein NUP62; TAIR: AT2G45000.1 structural constituent of nuclear pore; Swiss-Prot: sp|Q8L7F7|NUP62_ARATH Nuclear pore complex protein NUP62; TrEMBL-Plants: tr|K7K2H1|K7K2H1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0600000
GO terms
2
LotjaGi1g1v0600000.2
– Nuclear pore glycoprotein p62; TAIR: AT2G45000.1 structural constituent of nuclear pore; Swiss-Prot: sp|Q8L7F7|NUP62_ARATH Nuclear pore complex protein NUP62; TrEMBL-Plants: tr|A0A0L9U778|A0A0L9U778_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0600000
GO terms
2
LotjaGi1g1v0624300.1
– Transcription and mRNA export factor SUS1; TAIR: AT3G27100.1 transcription/mRNA export factor; Swiss-Prot: sp|Q6NQ54|SUS1_ARATH Transcription and mRNA export factor SUS1; TrEMBL-Plants: tr|A0A1J7HP79|A0A1J7HP79_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0624300
GO terms
5
LotjaGi1g1v0624300.2
– Transcription and mRNA export factor SUS1; TAIR: AT3G27100.1 transcription/mRNA export factor; Swiss-Prot: sp|Q6NQ54|SUS1_ARATH Transcription and mRNA export factor SUS1; TrEMBL-Plants: tr|A0A1J7HP79|A0A1J7HP79_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0624300
GO terms
5
LotjaGi2g1v0349100.1
– Nuclear pore complex protein; TAIR: AT1G10390.1 Nucleoporin autopeptidase; Swiss-Prot: sp|Q8RY25|NU98A_ARATH Nuclear pore complex protein NUP98A; TrEMBL-Plants: tr|A0A0L9UIU4|A0A0L9UIU4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0349100
GO terms
1
LotjaGi2g1v0397500.1
– Nuclear pore complex protein NUP58; TAIR: AT4G37130.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q8RWH9|NUP58_ARATH Nuclear pore complex protein NUP58; TrEMBL-Plants: tr|G7K9F1|G7K9F1_MEDTR Hydroxyproline-rich glycoprotein family protein, putative; Found in the gene: LotjaGi2g1v0397500
GO terms
4
LotjaGi3g1v0011200.1
– Nuclear pore complex protein Nup93a; TAIR: AT2G41620.1 Nucleoporin interacting component (Nup93/Nic96-like) family protein; Swiss-Prot: sp|O22224|NP93A_ARATH Nuclear pore complex protein NUP93A; TrEMBL-Plants: tr|Q2HVW5|Q2HVW5_MEDTR Nucleoporin interacting component, putative; Found in the gene: LotjaGi3g1v0011200
GO terms
2
LotjaGi3g1v0015500.1
– Ran-binding protein 1 domain-containing; TAIR: AT1G52380.1 NUP50 (Nucleoporin 50 kDa) protein; Swiss-Prot: sp|Q9C829|NU50A_ARATH Nuclear pore complex protein NUP50A; TrEMBL-Plants: tr|A0A0B2NU93|A0A0B2NU93_GLYSO E3 SUMO-protein ligase RanBP2; Found in the gene: LotjaGi3g1v0015500
GO terms
1
LotjaGi3g1v0381700.1
– Nuclear pore complex Nup205-like protein; TAIR: AT5G51200.2 nuclear pore complex protein (DUF3414); Swiss-Prot: sp|F4KBW6|NU205_ARATH Nuclear pore complex protein NUP205; TrEMBL-Plants: tr|K7KWK9|K7KWK9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0381700
GO terms
1
LotjaGi3g1v0411500.1
– Nuclear pore complex protein Nup107; TAIR: AT3G14120.2 nuclear pore complex protein; Swiss-Prot: sp|Q8L748|NU107_ARATH Nuclear pore complex protein NUP107; TrEMBL-Plants: tr|A0A0B2NWA3|A0A0B2NWA3_GLYSO Nuclear pore complex protein Nup107; Found in the gene: LotjaGi3g1v0411500
GO terms
2
LotjaGi4g1v0084400.1
– Nucleoporin GLE1; TAIR: AT1G13120.1 nucleoporin GLE1-like protein; Swiss-Prot: sp|Q0WPZ7|GLE1_ARATH Protein GLE1; TrEMBL-Plants: tr|A0A0L9U9X5|A0A0L9U9X5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0084400
GO terms
2
LotjaGi4g1v0084400.2
– Nucleoporin GLE1; TAIR: AT1G13120.1 nucleoporin GLE1-like protein; Swiss-Prot: sp|Q0WPZ7|GLE1_ARATH Protein GLE1; TrEMBL-Plants: tr|A0A0L9U9X5|A0A0L9U9X5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0084400
GO terms
2
LotjaGi4g1v0457000.4
– Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr|I1KQB7|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0457000
GO terms
3
LotjaGi4g1v0457000.6
– Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr|I1KQB7|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0457000
GO terms
3
LotjaGi4g1v0457000.7
– Nuclear pore complex protein Nup155; TAIR: AT1G14850.1 nucleoporin 155; Swiss-Prot: sp|F4HXV6|NU155_ARATH Nuclear pore complex protein NUP155; TrEMBL-Plants: tr|I1KQB7|I1KQB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0457000
GO terms
3
LotjaGi5g1v0201600.1
– Nuclear pore complex protein; TAIR: AT1G10390.1 Nucleoporin autopeptidase; Swiss-Prot: sp|Q8RY25|NU98A_ARATH Nuclear pore complex protein NUP98A; TrEMBL-Plants: tr|V7BU57|V7BU57_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0201600
GO terms
3
LotjaGi6g1v0095800.1
– Nucleoporin GLE1; TAIR: AT1G13120.1 nucleoporin GLE1-like protein; Swiss-Prot: sp|Q0WPZ7|GLE1_ARATH Protein GLE1; TrEMBL-Plants: tr|V7D389|V7D389_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0095800
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0016973
Biological process Poly(A)+ mRNA export from nucleus 1 2.17