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Lj3g3v2656650.1

Overview

Field Value
Gene ID Lj3g3v2656650
Transcript ID Lj3g3v2656650.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phospholipid:diacylglycerol acyltransferase 1-like [Cicer arietinum] gi|502156358|ref|XP_004510434.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 61 61
MobiDBLite 1 47 47
PANTHER 27 676 650 0
PANTHER 27 676 650 0
TMHMM 62 81 20
Phobius 62 81 20
Phobius 82 191 110
Gene3D 116 128 13 9.10E-15
SUPERFAMILY 116 130 15 2.45E-21
Pfam 143 390 248 9.40E-47
Phobius 192 212 21
Gene3D 197 314 118 9.10E-15
SUPERFAMILY 199 377 179 2.45E-21
Phobius 213 678 466
MobiDBLite 379 405 27
Pfam 467 638 172 3.60E-18
SUPERFAMILY 483 621 139 2.45E-21
Gene3D 518 532 15 9.10E-15
Gene3D 578 619 42 9.10E-15

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
Molecular function O-acyltransferase activity Catalysis of the transfer of an acyl group to an oxygen atom on the acceptor molecule.

Expression data

Expression pattern

Expression pattern of Lj3g3v2656650.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2656650.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.