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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2659870 |
| Transcript ID | Lj3g3v2659870.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | lipoxygenase [Pisum sativum] gi|2459611|gb|AAB71759.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 190 | 190 | 0 | ||
| SUPERFAMILY | 1 | 48 | 48 | 4.60E-14 | ||
| PANTHER | 1 | 190 | 190 | 0 | – | |
| Gene3D | 1 | 59 | 59 | 1.50E-23 | ||
| ProSiteProfiles | 1 | 43 | 43 | 14.998 | ||
| Pfam | 3 | 43 | 41 | 1.30E-04 | ||
| PRINTS | 13 | 31 | 19 | 2.50E-88 | ||
| PRINTS | 40 | 61 | 22 | 2.50E-88 | ||
| ProSiteProfiles | 47 | 738 | 692 | 308.416 | ||
| SUPERFAMILY | 51 | 738 | 688 | 6.02E-278 | ||
| Pfam | 56 | 721 | 666 | 0 | ||
| Gene3D | 60 | 147 | 88 | 1.30E-41 | – | |
| PRINTS | 79 | 95 | 17 | 2.50E-88 | ||
| MobiDBLite | 99 | 125 | 27 | – | – | |
| PRINTS | 112 | 131 | 20 | 2.50E-88 | ||
| Gene3D | 149 | 237 | 89 | 2.00E-32 | ||
| PRINTS | 180 | 201 | 22 | 2.50E-88 | ||
| PANTHER | 222 | 738 | 517 | 0 | – | |
| PANTHER | 222 | 738 | 517 | 0 | ||
| PRINTS | 225 | 241 | 17 | 2.50E-88 | ||
| Gene3D | 258 | 390 | 133 | 1.60E-51 | – | |
| PRINTS | 264 | 283 | 20 | 2.50E-88 | ||
| PRINTS | 329 | 353 | 25 | 2.50E-88 | ||
| PRINTS | 376 | 393 | 18 | 8.20E-24 | ||
| Gene3D | 392 | 738 | 347 | 1.80E-148 | – | |
| ProSitePatterns | 394 | 408 | 15 | – | ||
| PRINTS | 394 | 411 | 18 | 8.20E-24 | ||
| PRINTS | 414 | 434 | 21 | 8.20E-24 | ||
| ProSitePatterns | 421 | 431 | 11 | – | ||
| PRINTS | 651 | 665 | 15 | 2.50E-88 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj3g3v2659870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2659870.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.