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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2661200 |
| Transcript ID | Lj3g3v2661200.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | lipoxygenase [Pisum sativum] gi|2459611|gb|AAB71759.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 34 | 34 | 0 | ||
| PANTHER | 1 | 34 | 34 | 0 | – | |
| SMART | 9 | 173 | 165 | 4.20E-54 | ||
| SUPERFAMILY | 9 | 176 | 168 | 2.16E-48 | ||
| Gene3D | 12 | 185 | 174 | 2.10E-52 | ||
| ProSiteProfiles | 46 | 171 | 126 | 15.794 | ||
| PANTHER | 54 | 316 | 263 | 0 | – | |
| PANTHER | 54 | 316 | 263 | 0 | ||
| Pfam | 71 | 171 | 101 | 9.50E-12 | ||
| PRINTS | 141 | 159 | 19 | 4.20E-91 | ||
| PRINTS | 168 | 189 | 22 | 4.20E-91 | ||
| ProSiteProfiles | 175 | 794 | 620 | 281.638 | ||
| SUPERFAMILY | 177 | 793 | 617 | 1.31E-249 | ||
| Pfam | 184 | 794 | 611 | 3.30E-284 | ||
| Gene3D | 186 | 273 | 88 | 1.30E-41 | – | |
| PRINTS | 207 | 223 | 17 | 4.20E-91 | ||
| PRINTS | 238 | 257 | 20 | 4.20E-91 | ||
| Gene3D | 275 | 364 | 90 | 4.60E-33 | ||
| PRINTS | 306 | 327 | 22 | 4.20E-91 | ||
| PANTHER | 348 | 794 | 447 | 0 | – | |
| PANTHER | 348 | 794 | 447 | 0 | ||
| PRINTS | 351 | 367 | 17 | 4.20E-91 | ||
| Gene3D | 384 | 518 | 135 | 7.10E-53 | – | |
| PRINTS | 390 | 409 | 20 | 4.20E-91 | ||
| PRINTS | 457 | 481 | 25 | 4.20E-91 | ||
| PRINTS | 504 | 521 | 18 | 1.80E-23 | ||
| Gene3D | 520 | 794 | 275 | 1.20E-120 | – | |
| PRINTS | 522 | 539 | 18 | 1.80E-23 | ||
| ProSitePatterns | 522 | 536 | 15 | – | ||
| PRINTS | 542 | 562 | 21 | 1.80E-23 | ||
| ProSitePatterns | 549 | 559 | 11 | – | ||
| PRINTS | 779 | 793 | 15 | 4.20E-91 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj3g3v2661200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2661200.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.