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Lj3g3v2740700.2

Overview

Field Value
Gene ID Lj3g3v2740700
Transcript ID Lj3g3v2740700.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: arginase-like [Cicer arietinum] gi|502146607|ref|XP_004506527.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11358:SF32
25 343 319 1.10E-233 –
PANTHER
PTHR11358
25 343 319 1.10E-233
IPR006035
PIRSF
PIRSF036979
56 343 288 5.10E-59
IPR006035
ProSiteProfiles
PS51409
57 343 287 50.72
IPR006035
Gene3D
G3DSA:3.40.800.10
66 343 278 1.20E-66
IPR023696
SUPERFAMILY
SSF52768
67 341 275 1.98E-64 –
Pfam
PF00491
67 337 271 8.30E-65
IPR006035
CDD
cd11593
68 338 271 7.44E-97 –
ProSitePatterns
PS01053
269 290 22 –
IPR020855

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016813
Molecular function Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2.
Subterm of
GO:0046872
Molecular function Metal ion binding Interacting selectively and non-covalently with any metal ion.
Subterm of

Genome browser

LORE1 insertions 20

Expression data

Expression pattern

Expression pattern of Lj3g3v2740700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2740700.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.