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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2742980 |
| Transcript ID | Lj3g3v2742980.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Equilibrative nucleoside transporter [Medicago truncatula] gi|357453613|ref|XP_003597087.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | – | – | |
| PANTHER | 5 | 415 | 411 | 1.30E-297 | ||
| PANTHER | 5 | 415 | 411 | 1.30E-297 | ||
| PIRSF | 7 | 413 | 407 | 3.50E-83 | ||
| Phobius | 16 | 35 | 20 | – | – | |
| TMHMM | 17 | 39 | 23 | – | – | |
| SUPERFAMILY | 19 | 408 | 390 | 7.85E-07 | ||
| Phobius | 36 | 54 | 19 | – | – | |
| TMHMM | 54 | 73 | 20 | – | – | |
| Phobius | 55 | 73 | 19 | – | – | |
| Phobius | 74 | 84 | 11 | – | – | |
| Phobius | 85 | 104 | 20 | – | – | |
| TMHMM | 85 | 104 | 20 | – | – | |
| Phobius | 105 | 109 | 5 | – | – | |
| TMHMM | 109 | 126 | 18 | – | – | |
| Phobius | 110 | 129 | 20 | – | – | |
| PRINTS | 124 | 146 | 23 | 9.20E-05 | ||
| Pfam | 125 | 409 | 285 | 7.20E-37 | ||
| Phobius | 130 | 149 | 20 | – | – | |
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 150 | 172 | 23 | – | – | |
| PRINTS | 152 | 172 | 21 | 9.20E-05 | ||
| Phobius | 173 | 183 | 11 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 184 | 205 | 22 | – | – | |
| Phobius | 206 | 262 | 57 | – | – | |
| TMHMM | 256 | 278 | 23 | – | – | |
| Phobius | 263 | 282 | 20 | – | – | |
| Phobius | 283 | 293 | 11 | – | – | |
| TMHMM | 293 | 315 | 23 | – | – | |
| Phobius | 294 | 314 | 21 | – | – | |
| Phobius | 315 | 325 | 11 | – | – | |
| Phobius | 326 | 345 | 20 | – | – | |
| TMHMM | 327 | 344 | 18 | – | – | |
| Phobius | 346 | 350 | 5 | – | – | |
| PRINTS | 350 | 366 | 17 | 9.20E-05 | ||
| Phobius | 351 | 375 | 25 | – | – | |
| TMHMM | 354 | 376 | 23 | – | – | |
| Phobius | 376 | 386 | 11 | – | – | |
| PRINTS | 387 | 411 | 25 | 9.20E-05 | ||
| Phobius | 387 | 410 | 24 | – | – | |
| TMHMM | 389 | 411 | 23 | – | – | |
| Phobius | 411 | 415 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleoside transmembrane transporter activity | Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Nucleoside transmembrane transport | The directed movement of nucleoside across a membrane. |
Expression pattern of Lj3g3v2742980.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2742980.1, powered by CORGI.
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