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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2807910 |
| Transcript ID | Lj3g3v2807910.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable polyol transporter 4-like [Cicer arietinum] gi|502168758|ref|XP_004514460.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 51 | 51 | – | – | |
| PANTHER | 16 | 211 | 196 | 4.50E-140 | – | |
| PANTHER | 16 | 211 | 196 | 4.50E-140 | – | |
| SUPERFAMILY | 27 | 205 | 179 | 2.75E-33 | ||
| Gene3D | 38 | 206 | 169 | 6.00E-26 | – | |
| TMHMM | 52 | 74 | 23 | – | – | |
| Phobius | 52 | 81 | 30 | – | – | |
| ProSiteProfiles | 56 | 211 | 156 | 33.028 | ||
| Pfam | 56 | 210 | 155 | 4.10E-33 | ||
| CDD | 58 | 206 | 149 | 6.40E-23 | ||
| PRINTS | 64 | 74 | 11 | 9.80E-08 | ||
| Phobius | 82 | 92 | 11 | – | – | |
| Phobius | 93 | 111 | 19 | – | – | |
| TMHMM | 94 | 111 | 18 | – | – | |
| ProSitePatterns | 110 | 127 | 18 | – | ||
| Phobius | 112 | 122 | 11 | – | – | |
| Phobius | 123 | 141 | 19 | – | – | |
| TMHMM | 124 | 146 | 23 | – | – | |
| Phobius | 142 | 146 | 5 | – | – | |
| Phobius | 147 | 168 | 22 | – | – | |
| PRINTS | 147 | 166 | 20 | 9.80E-08 | ||
| TMHMM | 151 | 173 | 23 | – | – | |
| ProSitePatterns | 152 | 177 | 26 | – | ||
| Phobius | 169 | 179 | 11 | – | – | |
| Phobius | 180 | 202 | 23 | – | – | |
| TMHMM | 180 | 202 | 23 | – | – | |
| Phobius | 203 | 211 | 9 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v2807910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2807910.1, powered by CORGI.
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