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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2807920 |
| Transcript ID | Lj3g3v2807920.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable polyol transporter 4-like [Glycine max] gi|356549926|ref|XP_003543341.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 444 | 444 | 0 | – | |
| CDD | 1 | 407 | 407 | 4.79E-28 | ||
| ProSiteProfiles | 1 | 411 | 411 | 48.746 | ||
| PANTHER | 1 | 444 | 444 | 0 | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| SUPERFAMILY | 2 | 419 | 418 | 5.89E-63 | ||
| Gene3D | 6 | 170 | 165 | 5.30E-26 | – | |
| TIGRFAM | 14 | 418 | 405 | 2.00E-97 | ||
| Pfam | 16 | 422 | 407 | 1.60E-107 | ||
| Phobius | 21 | 38 | 18 | – | – | |
| TMHMM | 21 | 38 | 18 | – | – | |
| ProSitePatterns | 37 | 54 | 18 | – | ||
| Phobius | 39 | 49 | 11 | – | – | |
| TMHMM | 48 | 70 | 23 | – | – | |
| Phobius | 50 | 67 | 18 | – | – | |
| Phobius | 68 | 73 | 6 | – | – | |
| Phobius | 74 | 95 | 22 | – | – | |
| PRINTS | 74 | 93 | 20 | 1.10E-19 | ||
| TMHMM | 75 | 97 | 23 | – | – | |
| ProSitePatterns | 79 | 104 | 26 | – | ||
| Phobius | 96 | 106 | 11 | – | – | |
| Phobius | 107 | 128 | 22 | – | – | |
| TMHMM | 107 | 129 | 23 | – | – | |
| Phobius | 129 | 139 | 11 | – | – | |
| TMHMM | 136 | 158 | 23 | – | – | |
| Phobius | 140 | 159 | 20 | – | – | |
| Phobius | 160 | 259 | 100 | – | – | |
| Coils | 172 | 206 | 35 | – | – | |
| Gene3D | 224 | 423 | 200 | 3.40E-17 | – | |
| PRINTS | 233 | 243 | 11 | 1.10E-19 | ||
| TMHMM | 260 | 282 | 23 | – | – | |
| Phobius | 260 | 282 | 23 | – | – | |
| ProSitePatterns | 278 | 295 | 18 | – | ||
| Phobius | 283 | 288 | 6 | – | – | |
| Phobius | 289 | 312 | 24 | – | – | |
| TMHMM | 289 | 311 | 23 | – | – | |
| Phobius | 313 | 317 | 5 | – | – | |
| Phobius | 318 | 345 | 28 | – | – | |
| TMHMM | 321 | 343 | 23 | – | – | |
| PRINTS | 323 | 344 | 22 | 1.10E-19 | ||
| Phobius | 346 | 356 | 11 | – | – | |
| PRINTS | 346 | 358 | 13 | 1.10E-19 | ||
| TMHMM | 355 | 377 | 23 | – | – | |
| Phobius | 357 | 377 | 21 | – | – | |
| Phobius | 378 | 382 | 5 | – | – | |
| TMHMM | 382 | 404 | 23 | – | – | |
| Phobius | 383 | 407 | 25 | – | – | |
| Phobius | 408 | 450 | 43 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v2807920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2807920.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.