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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2874710 |
| Transcript ID | Lj3g3v2874710.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Cicer arietinum] gi|502148678|ref|XP_004507227.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| PANTHER | 3 | 298 | 296 | 3.80E-191 | – | |
| PANTHER | 3 | 298 | 296 | 3.80E-191 | – | |
| Phobius | 3 | 14 | 12 | – | – | |
| Phobius | 15 | 19 | 5 | – | – | |
| Phobius | 20 | 298 | 279 | – | – | |
| Hamap | 66 | 274 | 209 | 21.454 | ||
| Pfam | 72 | 276 | 205 | 2.00E-73 | ||
| TIGRFAM | 72 | 273 | 202 | 6.70E-45 | ||
| Coils | 248 | 278 | 31 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Photosystem II assembly | The aggregation, arrangement and bonding together of a set of components to form a photosystem II complex on the thylakoid membrane. The photosystem II complex consists of at least 20 polypeptides and around 80 cofactors in most organisms. | ||
| Biological process | Photosynthesis | The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds. |
Expression pattern of Lj3g3v2874710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2874710.1, powered by CORGI.
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