Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

GO:0010207

Overview

Field Value
Namespace Biological process
Short description Photosystem II assembly
Full defintion The aggregation, arrangement and bonding together of a set of components to form a photosystem II complex on the thylakoid membrane. The photosystem II complex consists of at least 20 polypeptides and around 80 cofactors in most organisms.
Subterm of

Relationships

The relationship of GO:0010207 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0010207, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

  • Drag and drop nodes to manually position (i.e. fix) them
  • Double click on a node to unfix the node
  • Press Alt and double click to visit the page containing further details of a GO term
  • Right clicking on a node will reveal a context menu

Controls

Force layout

Every force layout is different—we have picked a set of parameters which suits most GO ancestor tree chart well. If you mess something up—don't worry: hitting the "reset view" button above will reset the chart to its default layout.

Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCpz

Associated Lotus transcripts 20

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Oxygen evolving enhancer protein [Medicago truncatula] gi|357483147|ref|XP_003611860.1| 4
PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Glycine max] gi|356543780|ref|XP_003540338.1| 2
PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Cicer arietinum] gi|502083002|ref|XP_004487338.1| 2
PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Glycine max] gi|356543780|ref|XP_003540338.1| 2
PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like [Cicer arietinum] gi|502082899|ref|XP_004487306.1| 1
PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Cicer arietinum] gi|502148678|ref|XP_004507227.1| 2
PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Glycine max] gi|356559442|ref|XP_003548008.1| 4
Photosystem II 11 kDa protein-related [Theobroma cacao] gi|508713787|gb|EOY05684.1| 1
Photosystem II 11 kDa protein-related [Theobroma cacao] gi|508713787|gb|EOY05684.1| 1
Oxygen-evolving enhancer protein 1; TAIR: AT3G50820.1 photosystem II subunit O-2; Swiss-Prot: sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic; TrEMBL-Plants: tr|I3SU29|I3SU29_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0396500 4
Protein THYLAKOID FORMATION1, chloroplastic; TAIR: AT2G20890.1 photosystem II reaction center PSB29 protein; Swiss-Prot: sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic; TrEMBL-Plants: tr|I1LUC3|I1LUC3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0439400 2
Protein THYLAKOID FORMATION1, chloroplastic; TAIR: AT2G20890.1 photosystem II reaction center PSB29 protein; Swiss-Prot: sp|Q9SKT0|THF1_ARATH Protein THYLAKOID FORMATION 1, chloroplastic; TrEMBL-Plants: tr|A0A151RLL4|A0A151RLL4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0439400 2
Photosystem II Psb27 protein; TAIR: AT1G03600.1 photosystem II family protein; Swiss-Prot: sp|Q9LR64|PB27A_ARATH Photosystem II repair protein PSB27-H1, chloroplastic; TrEMBL-Plants: tr|A0A072VAN9|A0A072VAN9_MEDTR Photosystem II Pbs27 protein; Found in the gene: LotjaGi3g1v0442300 1
Protein THYLAKOID FORMATION1, chloroplastic; TAIR: AT2G20890.1 photosystem II reaction center PSB29 protein; Swiss-Prot: sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic; TrEMBL-Plants: tr|I3S759|I3S759_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0459700 2
Oxygen-evolving enhancer protein 1; TAIR: AT3G50820.1 photosystem II subunit O-2; Swiss-Prot: sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic; TrEMBL-Plants: tr|I1MNK0|I1MNK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0111900 4
Oxygen-evolving enhancer protein 1; TAIR: AT3G50820.1 photosystem II subunit O-2; Swiss-Prot: sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic; TrEMBL-Plants: tr|A0A0L9T5I1|A0A0L9T5I1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0112700_LC 4
Oxygen-evolving enhancer protein 1; TAIR: AT3G50820.1 photosystem II subunit O-2; Swiss-Prot: sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic; TrEMBL-Plants: tr|A0A0L9T5I1|A0A0L9T5I1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0112700_LC 4
Oxygen-evolving enhancer protein 1; TAIR: AT5G66570.1 PS II oxygen-evolving complex 1; Swiss-Prot: sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic; TrEMBL-Plants: tr|C6TKL8|C6TKL8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0112800_LC 4
Photosystem II protein; TAIR: AT1G05385.1 photosystem II 11 kDa protein-like protein; Swiss-Prot: sp|Q9ZVZ9|PB27B_ARATH Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic; TrEMBL-Plants: tr|I3SB38|I3SB38_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0313600 1
Photosystem II Psb27 protein; TAIR: AT1G05385.1 photosystem II 11 kDa protein-like protein; Swiss-Prot: sp|Q9ZVZ9|PB27B_ARATH Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic; TrEMBL-Plants: tr|I3SB38|I3SB38_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0313600 1

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
Biological process Photosystem II assembly 1 5.00