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Lj3g3v2903000.1

Overview

Field Value
Gene ID Lj3g3v2903000
Transcript ID Lj3g3v2903000.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: septum-promoting GTP-binding protein 1-like [Cicer arietinum] gi|502171628|ref|XP_004515072.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24073
86 275 190 8.20E-134 –
PANTHER
PTHR24073:SF515
86 275 190 8.20E-134 –
ProSiteProfiles
PS51419
91 281 191 10.873 –
Gene3D
G3DSA:3.40.50.300
95 262 168 1.90E-25
IPR027417
PRINTS
PR00449
97 118 22 1.00E-09 –
SUPERFAMILY
SSF52540
97 272 176 8.65E-28
IPR027417
SMART
SM00175
97 264 168 7.00E-05 –
Pfam
PF00071
98 261 164 4.40E-19
IPR001806
PRINTS
PR00449
138 160 23 1.00E-09 –
PRINTS
PR00449
199 212 14 1.00E-09 –
PRINTS
PR00449
239 261 23 1.00E-09 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj3g3v2903000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2903000.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.