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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2903020 |
| Transcript ID | Lj3g3v2903020.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: glutamate receptor 3.4-like [Glycine max] gi|356542088|ref|XP_003539503.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | – | – | |
| PANTHER | 1 | 129 | 129 | 1.20E-97 | – | |
| PANTHER | 1 | 129 | 129 | 1.20E-97 | – | |
| Gene3D | 14 | 128 | 115 | 3.20E-29 | – | |
| TMHMM | 25 | 47 | 23 | – | – | |
| Pfam | 26 | 128 | 103 | 2.30E-28 | ||
| Phobius | 27 | 47 | 21 | – | – | |
| Phobius | 48 | 58 | 11 | – | – | |
| Phobius | 59 | 77 | 19 | – | – | |
| Phobius | 78 | 88 | 11 | – | – | |
| Phobius | 89 | 113 | 25 | – | – | |
| TMHMM | 90 | 112 | 23 | – | – | |
| Phobius | 114 | 129 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ligand-gated ion channel activity | Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj3g3v2903020.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2903020.2, powered by CORGI.
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