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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2905120 |
| Transcript ID | Lj3g3v2905120.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Succinate dehydrogenase subunit [Medicago truncatula] gi|357471271|ref|XP_003605920.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 154 | 154 | – | – | |
| SignalP | 1 | 34 | 34 | – | – | |
| MobiDBLite | 24 | 51 | 28 | – | – | |
| PANTHER | 64 | 218 | 155 | 3.20E-34 | – | |
| PANTHER | 64 | 218 | 155 | 3.20E-34 | – | |
| MobiDBLite | 109 | 128 | 20 | – | – | |
| SUPERFAMILY | 126 | 218 | 93 | 5.56E-15 | – | |
| Gene3D | 132 | 219 | 88 | 1.40E-15 | – | |
| Pfam | 132 | 219 | 88 | 2.50E-12 | ||
| CDD | 132 | 218 | 87 | 8.74E-18 | – | |
| Phobius | 155 | 174 | 20 | – | – | |
| TMHMM | 159 | 181 | 23 | – | – | |
| Phobius | 175 | 193 | 19 | – | – | |
| Phobius | 194 | 214 | 21 | – | – | |
| TMHMM | 196 | 218 | 23 | – | – | |
| Phobius | 215 | 219 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. |
Expression pattern of Lj3g3v2905120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2905120.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.