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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2909710 |
| Transcript ID | Lj3g3v2909710.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | L-ascorbate oxidase-like protein [Medicago truncatula] gi|357471325|ref|XP_003605947.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| ProSiteProfiles | 1 | 20 | 20 | 5 | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| PANTHER | 1 | 200 | 200 | 2.10E-158 | – | |
| PANTHER | 1 | 200 | 200 | 2.10E-158 | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| Phobius | 24 | 205 | 182 | – | – | |
| SUPERFAMILY | 24 | 174 | 151 | 3.45E-38 | ||
| Gene3D | 27 | 147 | 121 | 2.40E-23 | ||
| CDD | 29 | 145 | 117 | 4.79E-76 | – | |
| Pfam | 34 | 147 | 114 | 3.00E-39 | ||
| Gene3D | 158 | 199 | 42 | 5.30E-05 | ||
| Pfam | 160 | 201 | 42 | 2.00E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Copper ion binding | Interacting selectively and non-covalently with copper (Cu) ions. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj3g3v2909710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2909710.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.