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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2948510 |
| Transcript ID | Lj3g3v2948510.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transcription factor LHW-like [Cicer arietinum] gi|502145882|ref|XP_004506222.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 259 | 259 | 0 | – | |
| PANTHER | 1 | 259 | 259 | 0 | ||
| Pfam | 5 | 176 | 172 | 1.10E-32 | ||
| PANTHER | 418 | 952 | 535 | 0 | – | |
| PANTHER | 418 | 952 | 535 | 0 | ||
| MobiDBLite | 722 | 766 | 45 | – | – | |
| ProSiteProfiles | 751 | 800 | 50 | 9.832 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. | ||
| Biological process | Root development | The process whose specific outcome is the progression of the root over time, from its formation to the mature structure. The root is the water- and mineral-absorbing part of a plant which is usually underground, does not bear leaves, tends to grow downwards and is typically derived from the radicle of the embryo. |
Expression pattern of Lj3g3v2948510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2948510.1, powered by CORGI.
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