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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3006210 |
| Transcript ID | Lj3g3v3006210.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nucleobase-ascorbate transporter 12-like [Glycine max] gi|356542709|ref|XP_003539808.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 26 | 26 | – | – | |
| PANTHER | 1 | 52 | 52 | 1.70E-101 | ||
| Phobius | 1 | 1 | 1 | – | – | |
| PANTHER | 1 | 52 | 52 | 1.70E-101 | ||
| Phobius | 1 | 17 | 17 | – | – | |
| Phobius | 2 | 13 | 12 | – | – | |
| Pfam | 3 | 49 | 47 | 2.20E-05 | ||
| TMHMM | 5 | 24 | 20 | – | – | |
| Phobius | 14 | 17 | 4 | – | – | |
| Phobius | 18 | 32 | 15 | – | – | |
| TMHMM | 31 | 50 | 20 | – | – | |
| Phobius | 33 | 49 | 17 | – | – | |
| Phobius | 50 | 85 | 36 | – | – | |
| PANTHER | 74 | 156 | 83 | 1.70E-101 | ||
| PANTHER | 74 | 156 | 83 | 1.70E-101 | ||
| TMHMM | 84 | 106 | 23 | – | – | |
| Phobius | 86 | 106 | 21 | – | – | |
| Phobius | 107 | 156 | 50 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v3006210.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3006210.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.