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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3155110 |
| Transcript ID | Lj3g3v3155110.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: aquaporin TIP1-1-like [Glycine max] gi|356542491|ref|XP_003539700.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 241 | 241 | 4.80E-176 | ||
| PANTHER | 1 | 241 | 241 | 4.80E-176 | – | |
| Gene3D | 13 | 241 | 229 | 1.20E-66 | ||
| Pfam | 16 | 234 | 219 | 1.50E-72 | ||
| SUPERFAMILY | 18 | 241 | 224 | 2.49E-65 | ||
| TMHMM | 20 | 42 | 23 | – | – | |
| PRINTS | 21 | 40 | 20 | 3.50E-50 | ||
| Phobius | 23 | 44 | 22 | – | – | |
| CDD | 26 | 237 | 212 | 9.49E-56 | ||
| Phobius | 45 | 55 | 11 | – | – | |
| Phobius | 56 | 77 | 22 | – | – | |
| TMHMM | 57 | 79 | 23 | – | – | |
| PRINTS | 65 | 89 | 25 | 3.50E-50 | ||
| Phobius | 78 | 103 | 26 | – | – | |
| ProSitePatterns | 83 | 91 | 9 | – | ||
| PRINTS | 102 | 121 | 20 | 3.50E-50 | ||
| TMHMM | 103 | 125 | 23 | – | – | |
| Phobius | 104 | 124 | 21 | – | – | |
| Phobius | 125 | 143 | 19 | – | – | |
| Phobius | 144 | 164 | 21 | – | – | |
| TMHMM | 145 | 164 | 20 | – | – | |
| PRINTS | 147 | 165 | 19 | 3.50E-50 | ||
| Phobius | 165 | 170 | 6 | – | – | |
| Phobius | 171 | 193 | 23 | – | – | |
| TMHMM | 171 | 193 | 23 | – | – | |
| PRINTS | 180 | 202 | 23 | 3.50E-50 | ||
| Phobius | 194 | 216 | 23 | – | – | |
| PRINTS | 217 | 237 | 21 | 3.50E-50 | ||
| TMHMM | 217 | 239 | 23 | – | – | |
| Phobius | 217 | 239 | 23 | – | – | |
| Phobius | 240 | 243 | 4 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v3155110.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3155110.1, powered by CORGI.
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