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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3271560 |
| Transcript ID | Lj3g3v3271560.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Glycine max] gi|356538925|ref|XP_003537951.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 567 | 567 | – | – | |
| PANTHER | 1 | 574 | 574 | 0 | – | |
| PANTHER | 1 | 574 | 574 | 0 | – | |
| Gene3D | 37 | 163 | 127 | 1.60E-34 | ||
| SMART | 41 | 137 | 97 | 3.90E-18 | ||
| SUPERFAMILY | 41 | 179 | 139 | 7.69E-35 | ||
| Pfam | 41 | 143 | 103 | 1.30E-21 | ||
| CDD | 41 | 165 | 125 | 3.56E-61 | – | |
| ProSiteProfiles | 42 | 122 | 81 | 14.734 | ||
| Gene3D | 197 | 309 | 113 | 5.10E-26 | ||
| Pfam | 201 | 307 | 107 | 4.30E-21 | ||
| SUPERFAMILY | 201 | 353 | 153 | 1.36E-31 | ||
| CDD | 202 | 351 | 150 | 1.56E-87 | – | |
| SMART | 202 | 300 | 99 | 1.30E-12 | ||
| ProSiteProfiles | 203 | 285 | 83 | 13.594 | ||
| Gene3D | 358 | 491 | 134 | 6.40E-29 | ||
| SUPERFAMILY | 362 | 492 | 131 | 6.69E-28 | ||
| Pfam | 362 | 470 | 109 | 1.70E-24 | ||
| CDD | 363 | 487 | 125 | 4.95E-65 | – | |
| SMART | 363 | 467 | 105 | 1.70E-15 | ||
| ProSiteProfiles | 364 | 452 | 89 | 10.471 | ||
| Phobius | 568 | 586 | 19 | – | – | |
| Phobius | 587 | 597 | 11 | – | – | |
| Phobius | 598 | 628 | 31 | – | – | |
| TMHMM | 603 | 625 | 23 | – | – | |
| Pfam | 615 | 770 | 156 | 6.50E-80 | ||
| Phobius | 629 | 713 | 85 | – | – | |
| PANTHER | 646 | 766 | 121 | 0 | – | |
| PANTHER | 646 | 766 | 121 | 0 | – | |
| Phobius | 714 | 742 | 29 | – | – | |
| TMHMM | 719 | 741 | 23 | – | – | |
| Phobius | 743 | 770 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj3g3v3271560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3271560.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.