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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3315960 |
| Transcript ID | Lj3g3v3315960.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: flowering time control protein FPA-like [Glycine max] gi|356538883|ref|XP_003537930.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 22 | 22 | – | – | |
| Gene3D | 11 | 93 | 83 | 3.70E-20 | ||
| SUPERFAMILY | 21 | 176 | 156 | 1.29E-37 | ||
| PANTHER | 21 | 380 | 360 | 0 | – | |
| PANTHER | 21 | 380 | 360 | 0 | – | |
| ProSiteProfiles | 23 | 95 | 73 | 15.613 | ||
| SMART | 24 | 91 | 68 | 2.40E-16 | ||
| Pfam | 25 | 85 | 61 | 3.20E-13 | ||
| CDD | 25 | 94 | 70 | 1.63E-19 | – | |
| Gene3D | 96 | 177 | 82 | 9.70E-19 | ||
| ProSiteProfiles | 100 | 172 | 73 | 15.716 | ||
| SMART | 101 | 168 | 68 | 1.00E-16 | ||
| Pfam | 102 | 166 | 65 | 5.50E-13 | ||
| CDD | 102 | 171 | 70 | 9.50E-19 | – | |
| MobiDBLite | 176 | 201 | 26 | – | – | |
| SUPERFAMILY | 211 | 295 | 85 | 2.55E-13 | ||
| Gene3D | 214 | 296 | 83 | 9.90E-14 | ||
| ProSiteProfiles | 220 | 293 | 74 | 10.684 | ||
| SMART | 221 | 289 | 69 | 2.80E-06 | ||
| CDD | 222 | 291 | 70 | 1.98E-16 | – | |
| Pfam | 232 | 286 | 55 | 3.40E-07 | ||
| PANTHER | 405 | 992 | 588 | 0 | – | |
| PANTHER | 405 | 992 | 588 | 0 | – | |
| Pfam | 503 | 619 | 117 | 2.00E-17 | ||
| MobiDBLite | 738 | 770 | 33 | – | – | |
| MobiDBLite | 894 | 959 | 66 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj3g3v3315960.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3315960.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.