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PF07744

Source: Pfam

Description

SPOC domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
Lj0g3v0132489.1
– PREDICTED: flowering time control protein FPA-like [Cicer arietinum] gi|502134068|ref|XP_004501989.1|
Domains
15
Lj0g3v0174419.1
– OSJNBa0033G05.18 [Oryza sativa Japonica Group] gi|38344894|emb|CAD41917.2|
Domains
5
Lj1g3v1931370.1
– Transcription elongation factor A protein [Medicago truncatula] gi|357466369|ref|XP_003603469.1|
Domains
11
Lj3g3v0370470.1
– PREDICTED: flowering time control protein FPA-like [Glycine max] gi|356538883|ref|XP_003537930.1|
Domains
8
Lj3g3v3315960.1
– PREDICTED: flowering time control protein FPA-like [Glycine max] gi|356538883|ref|XP_003537930.1|
Domains
13
Lj5g3v0308800.1
– Nucleic acid binding protein [Arabidopsis thaliana] gi|145336181|ref|NP_174096.3|
Domains
13
LotjaGi1g1v0389600.1
– SPOC domain/transcription elongation factor S-II, putative; TAIR: AT5G11430.1 SPOC domain / Transcription elongation factor S-II protein; Swiss-Prot: sp|Q92576|PHF3_HUMAN PHD finger protein 3; TrEMBL-Plants: tr|I1K905|I1K905_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0389600
Domains
12
LotjaGi3g1v0032200_LC.2
– Flowering time control protein FPA; TAIR: AT2G43410.1 RNA binding protein; Swiss-Prot: sp|Q8LPQ9|FPA_ARATH Flowering time control protein FPA; TrEMBL-Plants: tr|K7M985|K7M985_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0032200_LC
Domains
7
LotjaGi3g1v0032200_LC.3
– Flowering time control protein FPA; TAIR: AT2G43410.1 RNA binding protein; Swiss-Prot: sp|Q8LPQ9|FPA_ARATH Flowering time control protein FPA; TrEMBL-Plants: tr|K7M985|K7M985_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0032200_LC
Domains
7
LotjaGi3g1v0500200.1
– RNA-binding protein; TAIR: AT2G43410.2 RNA binding protein; Swiss-Prot: sp|Q8LPQ9|FPA_ARATH Flowering time control protein FPA; TrEMBL-Plants: tr|K7LPF1|K7LPF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0500200
Domains
14
LotjaGi5g1v0032800.1
– Nucleic acid binding protein; TAIR: AT1G27750.1 nucleic acid binding protein; Swiss-Prot: sp|Q8LPQ9|FPA_ARATH Flowering time control protein FPA; TrEMBL-Plants: tr|A0A0C3UJQ2|A0A0C3UJQ2_MEDTR SPOC domain protein; Found in the gene: LotjaGi5g1v0032800
Domains
12
LotjaGi6g1v0021900_LC.1
– SPOC domain / transcription elongation factor S-II protein; TAIR: AT2G25640.1 SPOC domain / Transcription elongation factor S-II protein; Swiss-Prot: sp|P47169|MET5_YEAST Sulfite reductase [NADPH] subunit beta; TrEMBL-Plants: tr|A0A1J7GA37|A0A1J7GA37_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0021900_LC
Domains
5
LotjaGi6g1v0192900.2
– RNA binding protein, putative; TAIR: AT4G12640.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q8LPQ9|FPA_ARATH Flowering time control protein FPA; TrEMBL-Plants: tr|G7J619|G7J619_MEDTR RNA recognition motif (RRM) containing protein; Found in the gene: LotjaGi6g1v0192900
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 7.69