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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3338420 |
| Transcript ID | Lj3g3v3338420.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: polyol transporter 5-like [Cicer arietinum] gi|502149160|ref|XP_004507415.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 496 | 496 | 2.30E-293 | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| PANTHER | 1 | 496 | 496 | 2.30E-293 | – | |
| TIGRFAM | 20 | 489 | 470 | 4.30E-102 | ||
| SUPERFAMILY | 22 | 239 | 218 | 3.40E-69 | ||
| Gene3D | 29 | 218 | 190 | 7.30E-29 | – | |
| TMHMM | 32 | 54 | 23 | – | – | |
| Phobius | 32 | 60 | 29 | – | – | |
| ProSiteProfiles | 36 | 483 | 448 | 47.236 | ||
| Pfam | 37 | 492 | 456 | 9.80E-104 | ||
| CDD | 39 | 478 | 440 | 6.62E-30 | ||
| PRINTS | 44 | 54 | 11 | 3.10E-22 | ||
| Phobius | 61 | 71 | 11 | – | – | |
| Phobius | 72 | 89 | 18 | – | – | |
| TMHMM | 74 | 91 | 18 | – | – | |
| ProSitePatterns | 90 | 107 | 18 | – | ||
| Phobius | 90 | 100 | 11 | – | – | |
| Phobius | 101 | 119 | 19 | – | – | |
| TMHMM | 103 | 125 | 23 | – | – | |
| Phobius | 120 | 124 | 5 | – | – | |
| Phobius | 125 | 147 | 23 | – | – | |
| PRINTS | 127 | 146 | 20 | 3.10E-22 | ||
| TMHMM | 129 | 151 | 23 | – | – | |
| ProSitePatterns | 132 | 157 | 26 | – | ||
| Phobius | 148 | 158 | 11 | – | – | |
| TMHMM | 158 | 180 | 23 | – | – | |
| Phobius | 159 | 177 | 19 | – | – | |
| Phobius | 178 | 188 | 11 | – | – | |
| Phobius | 189 | 212 | 24 | – | – | |
| TMHMM | 190 | 212 | 23 | – | – | |
| Phobius | 213 | 278 | 66 | – | – | |
| SUPERFAMILY | 266 | 491 | 226 | 3.40E-69 | ||
| Phobius | 279 | 300 | 22 | – | – | |
| Gene3D | 291 | 489 | 199 | 1.30E-17 | – | |
| Phobius | 301 | 328 | 28 | – | – | |
| PRINTS | 301 | 311 | 11 | 3.10E-22 | ||
| Phobius | 329 | 350 | 22 | – | – | |
| TMHMM | 329 | 348 | 20 | – | – | |
| Phobius | 351 | 356 | 6 | – | – | |
| Phobius | 357 | 380 | 24 | – | – | |
| TMHMM | 358 | 380 | 23 | – | – | |
| Phobius | 381 | 391 | 11 | – | – | |
| TMHMM | 387 | 409 | 23 | – | – | |
| Phobius | 392 | 417 | 26 | – | – | |
| PRINTS | 395 | 416 | 22 | 3.10E-22 | ||
| PRINTS | 418 | 430 | 13 | 3.10E-22 | ||
| Phobius | 418 | 428 | 11 | – | – | |
| Phobius | 429 | 449 | 21 | – | – | |
| Phobius | 450 | 454 | 5 | – | – | |
| TMHMM | 454 | 476 | 23 | – | – | |
| Phobius | 455 | 475 | 21 | – | – | |
| Phobius | 476 | 527 | 52 | – | – | |
| MobiDBLite | 494 | 527 | 34 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v3338420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3338420.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.