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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3430140 |
| Transcript ID | Lj3g3v3430140.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Hexose carrier [Medicago truncatula] gi|357455795|ref|XP_003598178.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 316 | 316 | 29.349 | ||
| PANTHER | 1 | 340 | 340 | 3.30E-244 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 1 | 340 | 340 | 3.30E-244 | – | |
| TIGRFAM | 1 | 322 | 322 | 3.40E-79 | ||
| Pfam | 1 | 327 | 327 | 7.80E-84 | ||
| SUPERFAMILY | 2 | 77 | 76 | 3.27E-39 | ||
| Phobius | 12 | 31 | 20 | – | – | |
| TMHMM | 13 | 30 | 18 | – | – | |
| Phobius | 32 | 42 | 11 | – | – | |
| TMHMM | 40 | 62 | 23 | – | – | |
| Phobius | 43 | 62 | 20 | – | – | |
| Phobius | 63 | 124 | 62 | – | – | |
| SUPERFAMILY | 104 | 325 | 222 | 3.27E-39 | ||
| CDD | 123 | 313 | 191 | 1.00E-11 | ||
| TMHMM | 124 | 146 | 23 | – | – | |
| Gene3D | 125 | 322 | 198 | 1.20E-17 | – | |
| Phobius | 125 | 154 | 30 | – | – | |
| PRINTS | 135 | 145 | 11 | 1.00E-14 | ||
| Phobius | 155 | 159 | 5 | – | – | |
| Phobius | 160 | 183 | 24 | – | – | |
| TMHMM | 161 | 183 | 23 | – | – | |
| ProSitePatterns | 179 | 196 | 18 | – | ||
| Phobius | 184 | 189 | 6 | – | – | |
| TMHMM | 190 | 212 | 23 | – | – | |
| Phobius | 190 | 212 | 23 | – | – | |
| Phobius | 213 | 223 | 11 | – | – | |
| Phobius | 224 | 246 | 23 | – | – | |
| TMHMM | 227 | 249 | 23 | – | – | |
| PRINTS | 229 | 250 | 22 | 1.00E-14 | ||
| Phobius | 247 | 265 | 19 | – | – | |
| PRINTS | 252 | 264 | 13 | 1.00E-14 | ||
| TMHMM | 261 | 283 | 23 | – | – | |
| Phobius | 266 | 285 | 20 | – | – | |
| Phobius | 286 | 290 | 5 | – | – | |
| Phobius | 291 | 312 | 22 | – | – | |
| TMHMM | 293 | 312 | 20 | – | – | |
| Phobius | 313 | 344 | 32 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v3430140.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3430140.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.