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Lj3g3v3464480.1

Overview

Field Value
Gene ID Lj3g3v3464480
Transcript ID Lj3g3v3464480.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like [Glycine max] gi|356526043|ref|XP_003531629.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11871:SF11
1 152 152 1.10E-121 –
PANTHER
PTHR11871
1 152 152 1.10E-121
IPR000009
Gene3D
G3DSA:2.130.10.10
2 85 84 6.70E-04
IPR015943
SUPERFAMILY
SSF50978
2 78 77 1.05E-05
IPR017986
PRINTS
PR00600
12 37 26 5.90E-39
IPR000009
PRINTS
PR00600
38 64 27 5.90E-39
IPR000009
PRINTS
PR00600
121 150 30 5.90E-39
IPR000009
SUPERFAMILY
SSF50978
123 147 25 1.05E-05
IPR017986
Gene3D
G3DSA:2.130.10.10
130 144 15 6.70E-04
IPR015943

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000159
Cellular component Protein phosphatase type 2A complex A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0019888
Molecular function Protein phosphatase regulator activity Modulates the activity of a protein phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a protein substrate molecule.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj3g3v3464480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3464480.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.